CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ga01522
(
Panicum virgatum
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
Pavir.Ga01522
T196745_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ga01522.1.p
GATA
7
42
CRHCGVTSTPLWRNGPPDKPVLCNACGSRWRTKGSL
Pavir.Ga01522.2.p
GATA
7
42
CRHCGVTSTPLWRNGPPDKPVLCNACGSRWRTKGSL
Links
Other
GATA
family TFs
Other
Panicum virgatum
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACYPI081804
Acyrthosiphon pisum
ACYPI081804
N
ACYPI27578
Acyrthosiphon pisum
ACYPI27578
N
ACYPI44036
Acyrthosiphon pisum
ACYPI44036
N