Thhalv10026300m.g (Eutrema salsugineum)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Thhalv10026300m.g T196845_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA16
M06897_2.00 		Arabidopsis thaliana
ATGATGATGATSATGATGATGATSATG
CATSATCATCATCATSATCATCATCAT		 Dap-seq
OMalley et al.(2016)
GATA16_col_a 		0.823 0.778
GATA15
M01997_2.00 		Arabidopsis thaliana
NNHGATCNN
NNGATCDNN		 PBM
Weirauch et al.(2014)
pTH7662 		0.803 0.778
GATA15
M06886_2.00 		Arabidopsis thaliana
GATGATGATGATGATGATS
SATCATCATCATCATCATC		 Dap-seq
OMalley et al.(2016)
GATA15_col_b 		0.803 0.778
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10026300m GATA 39 74

Links

Other GATA family TFs
Other Eutrema salsugineum TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSBTAP00000004005-D1 Bos grunniens ENSBTAP00000004005-D1 N
ENSCSAG00000019171 Chlorocebus sabaeus ENSCSAG00000019171 N
ENSLACG00000012827 Latimeria chalumnae ENSLACG00000012827 N
ENSMPUG00000019988 Mustela putorius furo ENSMPUG00000019988 N
ENSP00000377805 Macaca fascicularis ENSP00000377805 N
ENSPANG00000006957 Papio anubis ENSPANG00000006957 N
ENSPPYG00000003068 Pongo abelii ENSPPYG00000003068 N
ENSPSIG00000001900 Pelodiscus sinensis ENSPSIG00000001900 N
ENSSHAG00000003566 Sarcophilus harrisii ENSSHAG00000003566 N
ENSSTOG00000024637 Ictidomys tridecemlineatus ENSSTOG00000024637 N
TIGD3 Otolemur garnettii ENSOGAG00000027212 N
Tigd3 Mus musculus ENSMUSG00000044390 N
TIGD3 Pan troglodytes ENSPTRG00000003873 N
Tigd3 Rattus norvegicus ENSRNOG00000023318 N
TIGD3 Sorex araneus ENSSARG00000009391 N
TIGD3 Sus scrofa ENSSSCG00000012994 N
TIGD3 Tupaia belangeri ENSTBEG00000008871 N
TIGD3 Oryctolagus cuniculus ENSOCUG00000026984 N
TIGD3 Bos taurus ENSBTAG00000003079 N
TIGD3 Macaca mulatta ENSMMUG00000019165 N
TIGD3 Myotis lucifugus ENSMLUG00000003893 N
TIGD3 Loxodonta africana ENSLAFG00000032647 N
TIGD3 Gorilla gorilla ENSGGOG00000014762 N
TIGD3 Homo sapiens ENSG00000173825 N
TIGD3 Felis catus ENSFCAG00000025695 N
TIGD3 Equus caballus ENSECAG00000006896 N
TIGD3 Dasypus novemcinctus ENSDNOG00000004634 N
TIGD3 Cavia porcellus ENSCPOG00000009317 N
TIGD3 Callithrix jacchus ENSCJAG00000022193 N
TIGD3 Canis familiaris ENSCAFG00000013628 N