CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_Genewise1Plus.C_30973
(
Cryphonectria parasitica
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
estExt_Genewise1Plus.C_30973
T197069_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1Plus.C_30973
GATA
526
563
CSHCEIWGTCVWAVRDGPRGPRSLCNNCGFIYERDRKL
Links
Other
GATA
family TFs
Other
Cryphonectria parasitica
TFs
39 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA006856
Oryza indica
BGIOSGA006856
N
BRADI3G08280
Brachypodium distachyon
BRADI3G08280
N
F775_18168
Aegilops tauschii
F775_18168
N
GRMZM2G170559
Zea mays
GRMZM2G170559
N
GRMZM2G340177
Zea mays
GRMZM2G340177
N
LPERR02G07820
Leersia perrieri
LPERR02G07820
N
OGLUM02G09240
Oryza glumaepatula
OGLUM02G09240
N
OMERI02G10300
Oryza meridionalis
OMERI02G10300
N
ONIVA11G03290
Oryza nivara
ONIVA11G03290
N
OPUNC02G08070
Oryza punctata
OPUNC02G08070
N
OPUNC06G17210
Oryza punctata
OPUNC06G17210
N
ORUFI02G09060
Oryza rufipogon
ORUFI02G09060
N
OS02G0221100
Oryza sativa
OS02G0221100
N
Pavir.J30600
Panicum virgatum
Pavir.J30600
N
Pavir.J40109
Panicum virgatum
Pavir.J40109
N
Sb04g007795
Sorghum bicolor
Sb04g007795
N
Si007981m.g
Setaria italica
Si007981m.g
N
Si019540m.g
Setaria italica
Si019540m.g
N
Traes_6AS_4D5775944
Triticum aestivum
Traes_6AS_4D5775944
N
TRIUR3_19577
Triticum urartu
TRIUR3_19577
N