CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PMAA_040210
(
Penicillium marneffei
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
PMAA_040210
T197225_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
wc-2
M02016_2.00
Neurospora crassa
NNHGATNNN
NNNATCDNN
PBM
Weirauch et al.(2014)
pTH8611
0.867
0.944
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PMAA_040210.t1
GATA
386
421
CTDCGTLASPEWRKGPSGPKTLCNACGLRWAKKERK
Links
Other
GATA
family TFs
Other
Penicillium marneffei
TFs
147 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
G647_08807
Cladophialophora carrionii
G647_08807
N
0.000
PV04_02480
Capronia semiimmersa
PV04_02480
N
0.000
PV11_03819
Exophiala sideris
PV11_03819
N
0.000