CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-nMf.1.1.scaf30783-snap-gene-0.2
(
Meloidogyne floridensis
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
maker-nMf.1.1.scaf30783-snap-gene-0.2
T197647_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
maker-nMf.1.1.scaf30783-snap-gene-0.2-mRNA-1
GATA
38
74
CFICGITQTSHWYRDSMTQNDLCNSCYRKQYRTRTKT
Links
Other
GATA
family TFs
Other
Meloidogyne floridensis
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAPLG00000007145
Anas platyrhynchos
ENSAPLG00000007145
I
ENSBTAP00000012060-D1
Bos grunniens
ENSBTAP00000012060-D1
I
MLXIPL
Bos taurus
ENSBTAG00000009153
I
MLXIPL
Myotis lucifugus
ENSMLUG00000005594
I
MLXIPL
Sus scrofa
ENSSSCG00000007710
I
MLXIPL
Tursiops truncatus
ENSTTRG00000016482
I
Myotis_brandtii_MLXIPL_10014270
Myotis brandtii
Myotis_brandtii_MLXIPL_10014270
I