CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

AACERI_AaceriAEL245W *(Saccharomycetaceae sp ashbya aceri)* GCR1
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF12550 (GCR1_C)	IPR022210	AACERI_AaceriAEL245W	T198348_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
GCR1 M00914_2.00	Saccharomyces cerevisiae	RGVDDCBWVW	WBWVGHHBCY	PBM Gordan et al.(2011) Gcr1	0.759	0.759
GCR1 M08569_2.00	Saccharomyces cerevisiae	VCTTCCH	DGGAAGB	Misc DeBoer et al.(2011) YPL075W_2071	0.759	0.759
GCR1 M10606_2.00	Saccharomyces cerevisiae	RKCTTCCWS	SWGGAAGYY	Transfac Matys et al.(2006) F$GCR1_01	0.759	0.759
GCR1 M10607_2.00	Saccharomyces cerevisiae	Transfac license required	Transfac license required	Transfac Matys et al.(2006) F$GCR1_B	0.759	0.759
GCR1 M10608_2.00	Saccharomyces cerevisiae	Transfac license required	Transfac license required	Transfac Matys et al.(2006) F$GCR1_Q4	0.759	0.759
GCR1 M08456_2.00	Saccharomyces cerevisiae	RKCTTCCW	WGGAAGMY	COMPILED Mathelier et al.(2014) MA0304.1	0.759	0.759
For this family, TFs with SR scores > 0.700* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
AGO12118	GCR1	563	654	YKLSRDNKTIWDLYTEWYTGFDGKPSIKSLIERYGWRRWKVSEDSHFFPTRRIIINYIEKECDRGVAMGKYPSTLEREAVRKLVVKDLENFR

Links
Other GCR1 family TFs
Other *Saccharomycetaceae sp ashbya aceri* TFs