CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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DAPPUDRAFT_64332
(
Daphnia pulex
)
Grainyhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04516 (CP2)
IPR007604
DAPPUDRAFT_64332
T198881_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
grh
M06209_2.00
Drosophila melanogaster
MTKGTTYHVY
RBHRAACMAK
B1H
Zhu et al.(2011)
grh_FlyReg_FBgn0259211
0.779
0.779
grh
M10616_2.00
Drosophila melanogaster
NNDDNBGGTDTHDHVN
NBDHDAHACCVNHHNN
Transfac
Matys et al.(2006)
I$ELF1_01
0.779
0.779
grh
M10617_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$GRH_01
0.779
0.779
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFX66820
Grainyhead
84
288
AHLNSSRSRSWPDCNRQSEVDKIQIPKVFNQYGFRYYLESPISTSQRREDDRITYINKGQFYGITLEYVPDPERPLKNQTVKTMVMLVFREEKSPEDEAKAWQFWHGRQHSAKQRILDADTKNSSGLIGCIEEVAHNAICIYWNPLESSAKINVAVQCLSTDFSSQKGVKGLPLHLQIDTFDDPRDSIPVFHRGYCQVKVFCDKV
Links
Other
Grainyhead
family TFs
Other
Daphnia pulex
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI1G49980
Brachypodium distachyon
BRADI1G49980
N
0.000
GRMZM2G118690
Zea mays
GRMZM2G118690
N
0.000
LPERR06G01660
Leersia perrieri
LPERR06G01660
N
0.000
MLOC_15776
Hordeum vulgare
MLOC_15776
N
0.000
OB06G11850
Oryza brachyantha
OB06G11850
N
0.000
OBART06G01840
Oryza barthii
OBART06G01840
N
0.000
OGLUM06G01860
Oryza glumaepatula
OGLUM06G01860
N
0.000
OLONG_020703
Oryza longistaminata
OLONG_020703
N
0.000
OMERI06G01780
Oryza meridionalis
OMERI06G01780
N
0.000
ONIVA06G02210
Oryza nivara
ONIVA06G02210
N
0.000
OPUNC06G01720
Oryza punctata
OPUNC06G01720
N
0.000
ORGLA06G0019100
Oryza glaberrima
ORGLA06G0019100
N
0.000
ORUFI06G01870
Oryza rufipogon
ORUFI06G01870
N
0.000
OS06G0130600
Oryza sativa
OS06G0130600
N
0.000
Pavir.Db02349
Panicum virgatum
Pavir.Db02349
N
0.000
Sb10g002020
Sorghum bicolor
Sb10g002020
N
0.000
Traes_4AL_A02408BC8
Triticum aestivum
Traes_4AL_A02408BC8
N
0.000
Traes_7DS_FE8BC1125
Triticum aestivum
Traes_7DS_FE8BC1125
N
0.000