CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSAMXG00000000221
(
Astyanax mexicanus
)
Grainyhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04516 (CP2)
IPR007604
ENSAMXG00000000221
T198898_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Grhl2
M09126_2.00
Mus musculus
RDCCDGTYYKDC
GHMRRACHGGHY
Misc
Kulakovskiy et al.(2013)
GRHL2_MOUSE.H11MO.0.A
0.764
0.764
GRHL2
M08129_2.00
Homo sapiens
NNNAACTGGTTTNNN
NNNAAACCAGTTNNN
ChIP-seq
Mathelier et al.(2014)
MA1105.1
0.760
0.760
GRHL2
M09125_2.00
Homo sapiens
AACYDGYYBDDC
GHHVRRCHRGTT
Misc
Kulakovskiy et al.(2013)
GRHL2_HUMAN.H11MO.0.A
0.760
0.760
GRHL2
M09558_2.00
Homo sapiens
NRAACHDGHHDDDCHDGTTY
RAACHDGHHHDDCHDGTTYN
Misc
Heinz et al.(2010)
HBE-GRHL2_GSE46194
0.760
0.760
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSAMXP00000000235
Grainyhead
202
426
STFEDSYTGENVKFRVPTSLASQNTLYQQPPVDTFQYSIEASRSVRQKQGEGPMIYLNRGQYYDITLSESGASKGLRLPISKVRSVVMVVFGEDKCRDEQLKHWNYWHNRQHTAKQRVLDIADYKESFNTIGNLEEIAYNAVSFTWDVTEEAKVFITVNCLSTDFSSQKGVKGLPLMIQIDTYSYNNRSNKPIHRAYCQIKVFCDKGAERKIRDEERKQIRKKVK
Links
Other
Grainyhead
family TFs
Other
Astyanax mexicanus
TFs
74 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGABI2DRAFT_191136
Agaricus bisporus
AGABI2DRAFT_191136
N
0.000
BN946_scf184939.g72
Trametes cinnabarina
BN946_scf184939.g72
N
0.000
CC1G_07059
Coprinopsis cinerea
CC1G_07059
N
0.000
CY34DRAFT_12675
Suillus luteus
CY34DRAFT_12675
N
0.000
fgenesh1_pg.C_scaffold_4000174
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_4000174
N
0.000
fgenesh3_kg.11__36__641_1_CCOZ_CCPA_CCPB_CCPC_EXTA
Heterobasidion annosum
fgenesh3_kg.11__36__641_1_CCOZ_CCPA_CCPB_CCPC_EXTA
N
0.000
FOMPIDRAFT_132799
Fomitopsis pinicola
FOMPIDRAFT_132799
N
0.000
GALMADRAFT_244440
Galerina marginata
GALMADRAFT_244440
N
0.000
GLOTRDRAFT_78300
Gloeophyllum trabeum
GLOTRDRAFT_78300
N
0.000
HETIRDRAFT_439748
Heterobasidion irregulare
HETIRDRAFT_439748
N
0.000
JAAARDRAFT_194246
Jaapia argillacea
JAAARDRAFT_194246
N
0.000
JAAARDRAFT_47740
Jaapia argillacea
JAAARDRAFT_47740
N
0.000
K443DRAFT_670658
Laccaria amethystina
K443DRAFT_670658
N
0.000
LACBIDRAFT_296989
Laccaria bicolor
LACBIDRAFT_296989
N
0.000
M378DRAFT_463994
Amanita muscaria
M378DRAFT_463994
I
0.000
M378DRAFT_9324
Amanita muscaria
M378DRAFT_9324
N
0.000
M413DRAFT_29155
Hebeloma cylindrosporum
M413DRAFT_29155
N
0.000
Moror_12870
Moniliophthora roreri
Moror_12870
N
0.000
PAXINDRAFT_170453
Paxillus involutus
PAXINDRAFT_170453
N
0.000
PAXRUDRAFT_822144
Paxillus rubicundulus
PAXRUDRAFT_822144
N
0.000
PILCRDRAFT_401124
Piloderma croceum
PILCRDRAFT_401124
N
0.000
PILCRDRAFT_819471
Piloderma croceum
PILCRDRAFT_819471
N
0.000
PISMIDRAFT_112540
Pisolithus microcarpus
PISMIDRAFT_112540
N
0.000
PLEOSDRAFT_174562
Pleurotus ostreatus
PLEOSDRAFT_174562
N
0.000
PLICRDRAFT_45259
Plicaturopsis crispa
PLICRDRAFT_45259
N
0.000
SCHCODRAFT_76401
Schizophyllum commune
SCHCODRAFT_76401
N
0.000
SERLA73DRAFT_181394
Serpula lacrymans
SERLA73DRAFT_181394
N
0.000