CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Grhl2
(
Rattus norvegicus
)
Grainyhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04516 (CP2)
IPR007604
ENSRNOG00000007000
T199215_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Grhl2
M09126_2.00
Mus musculus
RDCCDGTYYKDC
GHMRRACHGGHY
Misc
Kulakovskiy et al.(2013)
GRHL2_MOUSE.H11MO.0.A
0.996
0.996
GRHL2
M08129_2.00
Homo sapiens
NNNAACTGGTTTNNN
NNNAAACCAGTTNNN
ChIP-seq
Mathelier et al.(2014)
MA1105.1
0.973
0.973
GRHL2
M09125_2.00
Homo sapiens
AACYDGYYBDDC
GHHVRRCHRGTT
Misc
Kulakovskiy et al.(2013)
GRHL2_HUMAN.H11MO.0.A
0.973
0.973
GRHL2
M09558_2.00
Homo sapiens
NRAACHDGHHDDDCHDGTTY
RAACHDGHHHDDCHDGTTYN
Misc
Heinz et al.(2010)
HBE-GRHL2_GSE46194
0.973
0.973
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000009337
Grainyhead
215
439
STYSESFKDGAPEKFRSTSVGADEYTYDQTGSGTFQYTLEATKSLRQKQGEGPMTYLNKGQFYAITLSETGDNKCFRHPISKVRSVVMVVFSEDKNRDEQLKYWKYWHSRQHTAKQRVLDIADYKESFNTIGNIEEIAYNAVSFTWDVNEEAKIFITVNCLSTDFSSQKGVKGLPLMIQIDTYSYNNRSNKPIHRAYCQIKVFCDKGAERKIRDEERKQNRKKGK
ENSRNOP00000069927
Grainyhead
214
438
STYSESFKDGAPEKFRSTSVGADEYTYDQTGSGTFQYTLEATKSLRQKQGEGPMTYLNKGQFYAITLSETGDNKCFRHPISKVRSVVMVVFSEDKNRDEQLKYWKYWHSRQHTAKQRVLDIADYKESFNTIGNIEEIAYNAVSFTWDVNEEAKIFITVNCLSTDFSSQKGVKGLPLMIQIDTYSYNNRSNKPIHRAYCQIKVFCDKGAERKIRDEERKQNRKKGK
Links
Other
Grainyhead
family TFs
Other
Rattus norvegicus
TFs
111 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCDUO_19291
Ancylostoma duodenale
ANCDUO_19291
N
DME_0000819001
Dracunculus medinensis
DME_0000819001
N
ENSMODG00000015057
Monodelphis domestica
ENSMODG00000015057
N
ENSORLG00000001239
Oryzias latipes
ENSORLG00000001239
N
EVEC_0001100601
Enterobius vermicularis
EVEC_0001100601
N
nAv.1.0.1.g04823
Acanthocheilonema viteae
nAv.1.0.1.g04823
N
OESDEN_02779
Oesophagostomum dentatum
OESDEN_02779
N
SMTD_0001904601
Schistosoma mattheei
SMTD_0001904601
N
SMUV_0000695101
Syphacia muris
SMUV_0000695101
N
SVUK_0001709201
Strongylus vulgaris
SVUK_0001709201
N
TBX3
Echinops telfairi
ENSETEG00000008128
I
TC015795
Tribolium castaneum
TC015795
N
TCNE_0000641601
Toxocara canis
TCNE_0000641601
N