Brh_R003016 (Buceros rhinoceros)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04516 (CP2) IPR007604 Brh_R003016 T199505_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GRHL1
M03071_2.00 		Homo sapiens
RACYKGWHNDWCMGGTT
AACCKGWHNDWCMRGTY		 SELEX
Jolma et al.(2013)
GRHL1_1 		0.836 0.836
GRHL1
M03072_2.00 		Homo sapiens
DAACCGGTTH
DAACCGGTTH		 SELEX
Jolma et al.(2013)
GRHL1_2 		0.836 0.836
GRHL1
M03073_2.00 		Homo sapiens
HWAACCGGTTTD
HAAACCGGTTWD		 SELEX
Jolma et al.(2013)
GRHL1_3 		0.836 0.836
GRHL1
M04887_2.00 		Homo sapiens
DAACCGGTTH
DAACCGGTTH		 SELEX
Yin et al.(2017)
GRHL1_eDBD_HT-SELEX 		0.836 0.836
GRHL1
M04888_2.00 		Homo sapiens
DAACMKGTTH
DAACMKGTTH		 SELEX
Yin et al.(2017)
GRHL1_eDBD_Methyl-HT-SELEX 		0.836 0.836
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Brh_R003016 Grainyhead 168 395

Links

Other Grainyhead family TFs
Other Buceros rhinoceros TFs

93 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_00317 Capronia coronata A1O1_00317 N 0.000
A1O3_02293 Capronia epimyces A1O3_02293 N 0.000
A1O5_03985 Cladophialophora psammophila A1O5_03985 N 0.000
A1O7_00193 Cladophialophora yegresii A1O7_00193 N 0.000
A1O9_12096 Exophiala aquamarina A1O9_12096 N 0.000
EPUS_04752 Endocarpon pusillum EPUS_04752 N 0.000
G647_00204 Cladophialophora carrionii G647_00204 N 0.000
HCBG_03081 Histoplasma capsulatum HCBG_03081 I 0.000
HMPREF1120_06167 Exophiala dermatitidis HMPREF1120_06167 N 0.000
PFICI_07364 Pestalotiopsis fici PFICI_07364 N 0.000
PV04_01911 Capronia semiimmersa PV04_01911 N 0.000
PV05_11348 Exophiala xenobiotica PV05_11348 N 0.000
PV07_10478 Cladophialophora immunda PV07_10478 N 0.000
PV08_05826 Exophiala spinifera PV08_05826 N 0.000
PV10_06455 Exophiala mesophila PV10_06455 N 0.000
PV11_07762 Exophiala sideris PV11_07762 N 0.000
Z517_08672 Fonsecaea pedrosoi Z517_08672 N 0.000
Z518_03766 Rhinocladiella mackenziei Z518_03766 N 0.000
Z519_03283 Cladophialophora bantiana Z519_03283 N 0.000