Cmyd_10003336 (Chelonia mydas)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04516 (CP2) IPR007604 Cmyd_10003336 T199513_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GRHL2
M08129_2.00 		Homo sapiens
NNNAACTGGTTTNNN
NNNAAACCAGTTNNN		 ChIP-seq
Mathelier et al.(2014)
MA1105.1 		0.898 0.898
GRHL2
M09125_2.00 		Homo sapiens
AACYDGYYBDDC
GHHVRRCHRGTT		 Misc
Kulakovskiy et al.(2013)
GRHL2_HUMAN.H11MO.0.A 		0.898 0.898
Grhl2
M09126_2.00 		Mus musculus
RDCCDGTYYKDC
GHMRRACHGGHY		 Misc
Kulakovskiy et al.(2013)
GRHL2_MOUSE.H11MO.0.A 		0.898 0.898
GRHL2
M09558_2.00 		Homo sapiens
NRAACHDGHHDDDCHDGTTY
RAACHDGHHHDDCHDGTTYN		 Misc
Heinz et al.(2010)
HBE-GRHL2_GSE46194 		0.898 0.898
GRHL1
M03071_2.00 		Homo sapiens
RACYKGWHNDWCMGGTT
AACCKGWHNDWCMRGTY		 SELEX
Jolma et al.(2013)
GRHL1_1 		0.777 0.777
GRHL1
M03072_2.00 		Homo sapiens
DAACCGGTTH
DAACCGGTTH		 SELEX
Jolma et al.(2013)
GRHL1_2 		0.777 0.777
GRHL1
M03073_2.00 		Homo sapiens
HWAACCGGTTTD
HAAACCGGTTWD		 SELEX
Jolma et al.(2013)
GRHL1_3 		0.777 0.777
GRHL1
M04887_2.00 		Homo sapiens
DAACCGGTTH
DAACCGGTTH		 SELEX
Yin et al.(2017)
GRHL1_eDBD_HT-SELEX 		0.777 0.777
GRHL1
M04888_2.00 		Homo sapiens
DAACMKGTTH
DAACMKGTTH		 SELEX
Yin et al.(2017)
GRHL1_eDBD_Methyl-HT-SELEX 		0.777 0.777
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10003336 Grainyhead 282 438

Links

Other Grainyhead family TFs
Other Chelonia mydas TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB00088.1 Alternaria brassicicola AB00088.1 N
COCC4DRAFT_87358 Bipolaris maydis COCC4DRAFT_87358 N
COCCADRAFT_90976 Bipolaris zeicola COCCADRAFT_90976 N
COCMIDRAFT_81530 Bipolaris oryzae COCMIDRAFT_81530 N
COCVIDRAFT_32721 Bipolaris victoriae COCVIDRAFT_32721 N
F503_03119 Ophiostoma piceae uamh F503_03119 N
fgenesh1_pg.sca_8_chr1_1_0000412 Nectria haematococca fgenesh1_pg.sca_8_chr1_1_0000412 N
gw1.2.32.1 Cochliobolus heterostrophus C5 gw1.2.32.1 N
HMPREF1624_07083 Sporothrix schenckii HMPREF1624_07083 N
NechaG74381 Fusarium solani NechaG74381 N
SETTUDRAFT_87447 Setosphaeria turcica SETTUDRAFT_87447 N
SPBR_06366 Sporothrix brasiliensis SPBR_06366 N