CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gfo_R011603
(
Geospiza fortis
)
Grainyhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04516 (CP2)
IPR007604
Gfo_R011603
T199537_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gfo_R011603
Grainyhead
195
414
ETLLFSDILKPQPEPPCPESYPTDGVKSDFEYTLGSPKAIHIKSGDSPMAYLNKGQFYPITLRTAGDSKCLHLSSNKVKSVVMIVFDNEKIPTEQLKFWKHWHSRQPTAKQRVIDVADCKENFNTVQNIEELAYNALSFVWNIHEEAKVFIGVNCLSTDFSSQKGVKGVPLNLQIDTYDCGSGSSQLVHRAVCQIKIFCDKGAERKMRDDERKQFRRKGK
Links
Other
Grainyhead
family TFs
Other
Geospiza fortis
TFs
58 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AB03358.1
Alternaria brassicicola
AB03358.1
N
0.000
ACRE_062880
Acremonium chrysogenum
ACRE_062880
I
0.000
CGGC5_7534
Colletotrichum gloeosporioides
CGGC5_7534
I
0.000
CH063_11966
Colletotrichum higginsianum
CH063_11966
I
0.000
CMQ_48
Grosmannia clavigera
CMQ_48
I
0.000
Cob_12403
Colletotrichum orbiculare
Cob_12403
I
0.000
COCC4DRAFT_21340
Bipolaris maydis
COCC4DRAFT_21340
N
0.000
COCCADRAFT_1690
Bipolaris zeicola
COCCADRAFT_1690
N
0.000
COCMIDRAFT_89716
Bipolaris oryzae
COCMIDRAFT_89716
N
0.000
COCSADRAFT_92985
Bipolaris sorokiniana
COCSADRAFT_92985
N
0.000
COCVIDRAFT_94504
Bipolaris victoriae
COCVIDRAFT_94504
N
0.000
CSUB01_03595
Colletotrichum sublineola
CSUB01_03595
I
0.000
estExt_fgenesh1_pg.C_30275
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_30275
N
0.000
FGRRES_00515
Fusarium graminearum
FGRRES_00515
I
0.000
FPSE_04421
Fusarium pseudograminearum
FPSE_04421
I
0.000
GLRG_01353
Colletotrichum graminicola
GLRG_01353
I
0.000
MPH_00439
Macrophomina phaseolina
MPH_00439
I
0.000
MYCTH_2297012
Myceliophthora thermophila
MYCTH_2297012
I
0.000
PTRG_07536
Pyrenophora triticirepentis
PTRG_07536
N
0.000
PTT_12768
Pyrenophora teres
PTT_12768
N
0.000
SNOG_04486
Stagonospora nodorum
SNOG_04486
I
0.000
THITE_2112457
Thielavia terrestris
THITE_2112457
I
0.000
TRIREDRAFT_73654
Trichoderma reesei
TRIREDRAFT_73654
I
0.000
TRIVIDRAFT_212339
Trichoderma virens
TRIVIDRAFT_212339
I
0.000
UCRNP2_4189
Neofusicoccum parvum
UCRNP2_4189
I
0.000
UCRPA7_6727
Togninia minima
UCRPA7_6727
I
0.000
UV8b_4299
Ustilaginoidea virens
UV8b_4299
I
0.000
W97_01077
Coniosporium apollinis
W97_01077
I
0.000