CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pg.C_sca_3_chr4_2_00062
(
Nectria haematococca
)
Grainyhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04516 (CP2)
IPR007604
estExt_fgenesh1_pg.C_sca_3_chr4_2_00062
T199570_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pg.C_sca_3_chr4_2_00062
Grainyhead
223
464
LQKTTPLVGLQSRQFSSPMTHPLPPSAEKFRFHSTLNAPTAMIKHSDEIPVTYLNKGQAYSLSVADTNATMPVAPGTKYRTFVRVSFEDDQQRQRPGVCWGLWKEGRGTNEAHQRGGKLQAVEYVEAGQPAEGDDKRTRVELESSSFDGFCVTWTPGINGPPEVNIAVRFNFLSTDFSHSKGVKGIPVRLCAKTHPVPCDPSQPAADANPDICYCKVKLFRDHGAERKLSNDVAHVKKSIDK
Links
Other
Grainyhead
family TFs
Other
Nectria haematococca
TFs
53 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACLA_049080
Aspergillus clavatus
CADACLAG00004857
N
AFUA_4G09860
Aspergillus fumigatus
CADAFUAG00008404
N
ANIA_02422
Aspergillus nidulans
CADANIAG00009130
D
ATEG_00757
Aspergillus terreus
CADATEAG00007193
N
AUEXF2481DRAFT_31379
Aureobasidium subglaciale
AUEXF2481DRAFT_31379
I
Bcin12g05680
Botrytis cinerea
Bcin12g05680
I
CADANGAG00004430
Aspergillus niger
CADANGAG00004430
I
CADAORAG00001777
Aspergillus oryzae
CADAORAG00001777
I
CFIO01_00857
Colletotrichum fioriniae
CFIO01_00857
I
COCMIDRAFT_41667
Bipolaris oryzae
COCMIDRAFT_41667
I
FVEG_10018
Fusarium verticillioides
FVEG_10018
I
M437DRAFT_79143
Aureobasidium melanogenum
M437DRAFT_79143
I
M438DRAFT_374304
Aureobasidium pullulans
M438DRAFT_374304
I
OIDMADRAFT_106891
Oidiodendron maius
OIDMADRAFT_106891
I
OIDMADRAFT_165229
Oidiodendron maius
OIDMADRAFT_165229
N
PaG_02455
Pseudozyma aphidis
PaG_02455
N
Pc12g09750
Penicillium chrysogenum
Pc12g09750
I
Pc22g11880
Penicillium chrysogenum
Pc22g11880
I
PCH_Pc12g09750
Penicillium rubens
PCH_Pc12g09750
I
PCH_Pc22g11880
Penicillium rubens
PCH_Pc22g11880
I
PDIP_25580
Penicillium digitatum
PDIP_25580
I
PV05_04545
Exophiala xenobiotica
PV05_04545
I
SS1G_14079
Sclerotinia sclerotiorum
SS1G_14079
I
U727_0043356081
Penicillium solitum
U727_0043356081
I