CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SCL21
(
Arabidopsis thaliana
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
AT2G04890
T199824_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT2G04890.1
GRAS
50
413
LKLVLVACAKAVSENNLLMARWCMGELRGMVSISGEPIQRLGAYMLEGLVARLAASGSSIYKSLQSREPESYEFLSYVYVLHEVCPYFKFGYMSANGAIAEAMKDEERIHIIDFQIGQGSQWIALIQAFAARPGGAPNIRITGVGDGSVLVTVKKRLEKLAKKFDVPFRFNAVSRPSCEVEVENLDVRDGEALGVNFAYMLHHLPDESVSMENHRDRLLRMVKSLSPKVVTLVEQECNTNTSPFLPRFLETLSYYTAMFESIDVMLPRNHKERINIEQHCMARDVVNIIACEGAERIERHELLGKWKSRFSMAGFEPYPLSSIISATIRALLRDYSNGYAIEERDGALYLGWMDRILVSSCAWK
Links
Other
GRAS
family TFs
Other
Arabidopsis thaliana
TFs
52 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGABI2DRAFT_224213
Agaricus bisporus
AGABI2DRAFT_224213
N
BOTBODRAFT_50846
Botryobasidium botryosum
BOTBODRAFT_50846
N
CERSUDRAFT_89102
Ceriporiopsis subvermispora
CERSUDRAFT_89102
N
CNC03930
Cryptococcus neoformans
CNC03930
N
DICSQDRAFT_163586
Dichomitus squalens
DICSQDRAFT_163586
N
estExt_Genewise1.C_70735
Heterobasidion annosum
estExt_Genewise1.C_70735
N
FIBRA_04563
Fibroporia radiculosa
FIBRA_04563
N
FOMPIDRAFT_1031471
Fomitopsis pinicola
FOMPIDRAFT_1031471
N
GALMADRAFT_238181
Galerina marginata
GALMADRAFT_238181
N
GLOTRDRAFT_66280
Gloeophyllum trabeum
GLOTRDRAFT_66280
N
HETIRDRAFT_384208
Heterobasidion irregulare
HETIRDRAFT_384208
N
HYDPIDRAFT_182671
Hydnomerulius pinastri
HYDPIDRAFT_182671
N
JAAARDRAFT_30454
Jaapia argillacea
JAAARDRAFT_30454
N
K443DRAFT_672892
Laccaria amethystina
K443DRAFT_672892
N
M407DRAFT_30153
Tulasnella calospora
M407DRAFT_30153
N
M408DRAFT_198102
Serendipita vermifera
M408DRAFT_198102
N
M413DRAFT_444187
Hebeloma cylindrosporum
M413DRAFT_444187
N
M422DRAFT_55406
Sphaerobolus stellatus
M422DRAFT_55406
N
Moror_12409
Moniliophthora roreri
Moror_12409
N
PHACADRAFT_262394
Phanerochaete carnosa
PHACADRAFT_262394
N
PHLGIDRAFT_126149
Phlebiopsis gigantea
PHLGIDRAFT_126149
N
PIIN_00682
Piriformospora indica
PIIN_00682
N
PILCRDRAFT_812975
Piloderma croceum
PILCRDRAFT_812975
N
SCHCODRAFT_81726
Schizophyllum commune
SCHCODRAFT_81726
N
SERLA73DRAFT_55337
Serpula lacrymans
SERLA73DRAFT_55337
N