CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra027378
(
Brassica rapa
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Bra027378
T199997_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra027378.1-P
GRAS
148
510
AEQLLNPCALAITARNSSRVQHYICVLSELASSCGDSNHRLASFGLCALKKHISTSFVPSSTLTFASAEVKMFQKTLLKFYEVSPWFALPNNMANSAILQILSQEPRDKTDLHILDIGVSHGMQWPTLLEALCCRPEGPPLQVRITVVSDLTADIPFSVGPPSYNYASQLIGFARSLNINLQISVIDKSQLIDTSPHETFIVCAQFRLYQLKNSITDERSEALKALRSLNPKGVVLCEYNGEGSSSVDFAADFSRKLDYLWKFLDSTSYGFKEENSEERNLMEGEATKVLMSSGDTNEGKEIWYERMRKAGFSAEAFGEDAIDGAKSLLRKYDNNWEIKMEDEDTFAGLLWKGEEVSFCSLWK
Links
Other
GRAS
family TFs
Other
Brassica rapa
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Alligator_sinensis_CCG013964.1
Alligator sinensis
Alligator_sinensis_CCG013964.1
N
Cmyd_10003616
Chelonia mydas
Cmyd_10003616
N
ENSACAG00000010650
Anolis carolinensis
ENSACAG00000010650
N
ENSAMXG00000013012
Astyanax mexicanus
ENSAMXG00000013012
N
ENSLACG00000008725
Latimeria chalumnae
ENSLACG00000008725
N
ENSOPRG00000017040
Ochotona princeps
ENSOPRG00000017040
I
ENSPFOG00000014275
Poecilia formosa
ENSPFOG00000014275
N
ENSPSIG00000013341
Pelodiscus sinensis
ENSPSIG00000013341
N
ENSSHAG00000004332
Sarcophilus harrisii
ENSSHAG00000004332
N
ENSTRUG00000010240
Takifugu rubripes
ENSTRUG00000010240
N
ENSXMAG00000014452
Xiphophorus maculatus
ENSXMAG00000014452
N
Ogr03674
Ophisaurus gracilis
Ogr03674
N
ZBTB45
Sorex araneus
ENSSARG00000001558
I
ZBTB45
Tetraodon nigroviridis
ENSTNIG00000003273
N
zbtb45.L
Xenopus laevis
XB-GENE-17330664
N
zbtb45.S
Xenopus laevis
XB-GENE-5817023
N