CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_kg.205__1__AT5G52510.1
(
Arabidopsis lyrata
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
fgenesh2_kg.205__1__AT5G52510.1
T200121_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_kg.205__1__AT5G52510.1
GRAS
191
571
SRQTVMEIATAIAEGKTEIATEILARVSQTPNLERSSEEKLVDFMVTALRSRINPAESLASPATELYGKEHLISTQLLNELSPCYKLGFTAANLAILNAAGNNDAGMMMLHVIDFDIGEGGQYVNLLQTLSTRRNGKNQNQNSPVVKITAVTNNVYGFLVDGGGEERLKVVGDLLSQLGNRLGISVSFNVVASLRLGDLSRESLGCDPDEPLAVNLAFKLYRVPDESVCTENPRDELLRRVKGLKPRVVTLVEQEMNSNTAPFLGRVSESCACYGALLDSVESTVPSLNSDRVKVEEGIGRKLINAVACEGIDRIERCEVFGKWRMRMSMAGFELMPLSEKIADRLNNGNLAHPGFTVKEDNGGVCFGWMGRTLAVASAWR
Links
Other
GRAS
family TFs
Other
Arabidopsis lyrata
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSOARG00000001296
Ovis aries
ENSOARG00000001296
N
ENSTSYG00000008769
Tarsius syrichta
ENSTSYG00000008769
N
ZNF696
Dasypus novemcinctus
ENSDNOG00000047750
N
ZNF696
Microcebus murinus
ENSMICG00000014798
N
ZNF696
Otolemur garnettii
ENSOGAG00000024758
N
ZNF696
Sus scrofa
ENSSSCG00000006959
N