CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_3g056110
(
Medicago truncatula
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
MTR_3g056110
T200536_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AES70512
GRAS
172
542
LKEMLYTCAKAVDENDIETIEWMVTELRKIVSVSGSPIERLGAYMLEALVSKIASSGSTIYKSLKCSEPTGNELLSYMHVLYEICPYFKFGYMSANGAIAEAMKEENEVHIIDFQIGQGTQWVSLIQALARRPGGPPKIRITGIDDSYSSNVRGGGVDIVGEKLLTLAQSCHVPFEFHAVRVYPSEVRLEDFELRPNEAVAVNFAIMLHHVPDESVNIHNHRDRLLRLAKHMSPKVVTLVEQEFNTNNAPFLQRFLETMNYYSAVYESIDVVLPRDHKERINVEQHCLAREVVNLVACEGEERVERHELLSKWRMRFTMAGFTPYPLSSFINSSIKNLLESYRGHYTLEERDGALFLGWMNQDLIASCAWR
Links
Other
GRAS
family TFs
Other
Medicago truncatula
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACOC_0000703501
Angiostrongylus costaricensis
ACOC_0000703501
I
0.000
ANCCAN_23624
Ancylostoma caninum
ANCCAN_23624
I
0.000
ANCCAN_24706
Ancylostoma caninum
ANCCAN_24706
I
0.000
ANCCEY_02877
Ancylostoma ceylanicum
ANCCEY_02877
I
0.000
ANCDUO_15205
Ancylostoma duodenale
ANCDUO_15205
I
0.000
ASIM_0001298301
Anisakis simplex
ASIM_0001298301
I
0.000
Bm5024
Brugia malayi
Bm5024
I
0.000
CapteG2449
Capitella teleta
CapteG2449
N
0.000
CGOC_0000822101
Cylicostephanus goldi
CGOC_0000822101
I
0.000
DICVIV_00921
Dictyocaulus viviparus
DICVIV_00921
I
0.000
EEL_0000266401
Elaeophora elaphi
EEL_0000266401
I
0.000
EVEC_0001110501
Enterobius vermicularis
EVEC_0001110501
I
0.000
HCOI02128500
Haemonchus contortus
HCOI02128500
I
0.000
LOAG_14553
Loa loa
LOAG_14553
I
0.000
NBR_0001988501
Nippostrongylus brasiliensis
NBR_0001988501
I
0.000
NECAME_07738
Necator americanus
NECAME_07738
I
0.000
Sjc_0122310
Schistosoma japonicum
Sjc_0122310
I
0.000
Smp_162760
Schistosoma mansoni
Smp_162760
N
0.000
SMRZ_0000596101
Schistosoma margrebowiei
SMRZ_0000596101
I
0.000
SMTD_0001301801
Schistosoma mattheei
SMTD_0001301801
I
0.000
SVUK_0000405601
Strongylus vulgaris
SVUK_0000405601
I
0.000
T265_07444
Opisthorchis viverrini
T265_07444
N
0.000
TsM_000259000
Taenia solium
TsM_000259000
N
0.000
WUBG_06449
Wuchereria bancrofti
WUBG_06449
I
0.000