CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OB05G28200
(
Oryza brachyantha
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
OB05G28200
T200603_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OB05G28200.1
GRAS
110
333
MISLLMECAAAMSVGNLADANGTLLELSQMASPYAASCGERLVAYFVRAMTARLVGSWVGVAAPLAQPPCAAINAAFRALYNVAPFARLAYLACNQTILEAFHGKRLVHIVDLDVVPGGALQWLSLLPALAARPGGPPVIRVTGFGMSASVLHDTGNQLAGLARKLCMSFEFYAVAKRPGDADAVADVPGRRPGEVVAVHWLRHSMCNQYQRRQQIESMVSTKR
Links
Other
GRAS
family TFs
Other
Oryza brachyantha
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cmyd_10013605
Chelonia mydas
Cmyd_10013605
I
ENSGMOG00000007778
Gadus morhua
ENSGMOG00000007778
N
ENSLOCG00000014493
Lepisosteus oculatus
ENSLOCG00000014493
I
ENSLOCG00000014496
Lepisosteus oculatus
ENSLOCG00000014496
I
ENSLOCG00000017951
Lepisosteus oculatus
ENSLOCG00000017951
I
ENSMEUG00000011159
Macropus eugenii
ENSMEUG00000011159
I
ENSONIG00000002991
Oreochromis niloticus
ENSONIG00000002991
I
ENSORLG00000014656
Oryzias latipes
ENSORLG00000014656
I
ENSORLG00000014659
Oryzias latipes
ENSORLG00000014659
I
ENSPFOG00000015962
Poecilia formosa
ENSPFOG00000015962
N
ENSSHAG00000013251
Sarcophilus harrisii
ENSSHAG00000013251
I
ENSTNIG00000000556
Tetraodon nigroviridis
ENSTNIG00000000556
N
ENSTRUG00000015316
Takifugu rubripes
ENSTRUG00000015316
I
MESP2
Monodelphis domestica
ENSMODG00000024701
I
mespab
Danio rerio
ENSDARG00000068761
I
mespb
Xenopus tropicalis
XB-GENE-970939
N
mespb.L
Xenopus laevis
XB-GENE-970944
N
mespb.S
Xenopus laevis
XB-GENE-17337060
N
mespba
Danio rerio
ENSDARG00000030347
N
mespbb
Danio rerio
ENSDARG00000097947
N