CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SCL5
(
Populus trichocarpa
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
POPTR_0001s37270
T201171_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0001s37270.1
GRAS
163
533
LKEALCTCALAIANGDMFTVEWLMSELRQMVSVTGEPIQRLGAYMLEGLVARLASSGSSIYNALRCKEPAGADLLSYMLLLYEACPYFKFGYMSANGAIADAMKDEISVHIIDFQIAQGSQWVTLIQALAARPGGPPRIRITGIDDSTSAYARGGGLDIVGKRLLKLAESYKVPFEFHTAGVSASEIQIENLGIQPGEAVAVNFALTLHHLPDESVGTQNHRDRLLRLVKSLSPKVVTLVEHESNTNTVPFFARFVETLNYYLAIFESIDVTLPRENKKRISVEQHCLAREVVNIVACEGAERVERHEPLGKWRSRFEMAGFTPYPLSSFVNSTIKILLENYSEKYTLEERDGALFLGWMNRPLVASCAWR
POPTR_0001s37270.2
GRAS
163
533
LKEALCTCALAIANGDMFTVEWLMSELRQMVSVTGEPIQRLGAYMLEGLVARLASSGSSIYNALRCKEPAGADLLSYMLLLYEACPYFKFGYMSANGAIADAMKDEISVHIIDFQIAQGSQWVTLIQALAARPGGPPRIRITGIDDSTSAYARGGGLDIVGKRLLKLAESYKVPFEFHTAGVSASEIQIENLGIQPGEAVAVNFALTLHHLPDESVGTQNHRDRLLRLVKSLSPKVVTLVEHESNTNTVPFFARFVETLNYYLAIFESIDVTLPRENKKRISVEQHCLAREVVNIVACEGAERVERHEPLGKWRSRFEMAGFTPYPLSSFVNSTIKILLENYSEKYTLEERDGALFLGWMNRPLVASCAWR
POPTR_0001s37270.3
GRAS
163
533
LKEALCTCALAIANGDMFTVEWLMSELRQMVSVTGEPIQRLGAYMLEGLVARLASSGSSIYNALRCKEPAGADLLSYMLLLYEACPYFKFGYMSANGAIADAMKDEISVHIIDFQIAQGSQWVTLIQALAARPGGPPRIRITGIDDSTSAYARGGGLDIVGKRLLKLAESYKVPFEFHTAGVSASEIQIENLGIQPGEAVAVNFALTLHHLPDESVGTQNHRDRLLRLVKSLSPKVVTLVEHESNTNTVPFFARFVETLNYYLAIFESIDVTLPRENKKRISVEQHCLAREVVNIVACEGAERVERHEPLGKWRSRFEMAGFTPYPLSSFVNSTIKILLENYSEKYTLEERDGALFLGWMNRPLVASCAWR
Links
Other
GRAS
family TFs
Other
Populus trichocarpa
TFs
90 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MAJ_08234
Metarhizium majus
MAJ_08234
N
MANI_018859
Metarhizium anisopliae
MANI_018859
N
X797_008407
Metarhizium robertsii
X797_008407
N