CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0002s14500
(
Populus trichocarpa
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
POPTR_0002s14500
T201178_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0002s14500.1
GRAS
242
601
IINPICEAAELIETGNPVLAQGILARLNHQLSVPIGKPYQRTAFYFKEALQLLLNMNNNNSIGTAYNPIFKIGAYKSFSEISPILQFANFTCNQALLEAFEGFERIHVVDFDIGYGGQWASLMQELALRNGGAPSLKITAFVSPSSHDELELELGFTQENLRIFASEINMPFELEILSLESLGSVSRPMTLCTLDKEVIAVNLPLGVFSNYPSTLPVVLRFVKQLSPKVVVSLDSGCDRSDLPFAHHINHAIQSYTSLLESLDAVNVNLDILQKIERFLVQPCIERMVLGRHGCSDRTTPWRSLFLQSGFTPLTFSNFTESQAECLVQRTPVKGFHVEKKQSSLVLCWQQRDLVSVSAWS
Links
Other
GRAS
family TFs
Other
Populus trichocarpa
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA020074
Oryza indica
BGIOSGA020074
N
BRADI2G22010
Brachypodium distachyon
BRADI2G22010
N
GRMZM2G037286
Zea mays
GRMZM2G037286
N
OGLUM05G21920
Oryza glumaepatula
OGLUM05G21920
N
OMERI05G18690
Oryza meridionalis
OMERI05G18690
N
ORUFI05G21990
Oryza rufipogon
ORUFI05G21990
N
Pavir.J06020
Panicum virgatum
Pavir.J06020
N
Sb09g023750
Sorghum bicolor
Sb09g023750
N