CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0003s11020
(
Populus trichocarpa
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
POPTR_0003s11020
T201182_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0003s11020.1
GRAS
390
752
LLDQLYKAAELVGTGNFSHAQGILARLNQQLFPTGKPLHRAAFYFKEALQLLILMNNNSVTAPPPRSPTPFDVIFKMSAYKVLSEVSPLIQFVNFTCNQALLEAVDDADRIHIVDFDIGFGAQWASFMQELPRNRGGRSLKTTAFASPSTHHPVELSLMRDNLTQFANEIGLSFELDVINFDSLEQHCYSLPFFRTSEHEAVVVNFPIWCSSNQPSALPSLLRFIKQLSPKIVVSLDRGCDRSDLPFPQHILHALQSYTHLLESLDAVNATTDDVNKIERFLLQPRIESTVLGRLRATDKMPNWKTIFASAGFSPVTFSNFTETQAECVVKRTPVRGFHVERQQALLVLFWQRRELMSASAWR
Links
Other
GRAS
family TFs
Other
Populus trichocarpa
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Afo_R005791
Aptenodytes forsteri
Afo_R005791
N
0.000
BTMF_0000932701
Brugia timori
BTMF_0000932701
N
0.000
genemark-nMf.1.1.scaf04821-processed-gene-0.1
Meloidogyne floridensis
genemark-nMf.1.1.scaf04821-processed-gene-0.1
N
0.000
Gfo_R011132
Geospiza fortis
Gfo_R011132
N
0.000
GI15417
Drosophila mojavensis
FBgn0138166
N
0.000
GL14745
Drosophila persimilis
FBgn0152349
N
0.000
Hba_13069
Heterorhabditis bacteriophora
Hba_13069
N
0.000
MESCA000014
Megaselia scalaris
MESCA000014
N
0.000
nAv.1.0.1.g00376
Acanthocheilonema viteae
nAv.1.0.1.g00376
N
0.000
nOo.2.0.1.g10764
Onchocerca ochengi
nOo.2.0.1.g10764
N
0.000
OFLC_0001019101
Onchocerca flexuosa
OFLC_0001019101
N
0.000
POU4F1
Taeniopygia guttata
ENSTGUG00000005421
N
0.000
POU4F2
Takifugu rubripes
ENSTRUG00000001400
N
0.000
PPAI005468
Phlebotomus papatasi
PPAI005468
N
0.000
SSLN_0001714501
Schistocephalus solidus
SSLN_0001714501
N
0.000
SVUK_0000379901
Strongylus vulgaris
SVUK_0000379901
N
0.000