POPTR_0005s15900 (Populus trichocarpa)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 POPTR_0005s15900 T201194_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0005s15900.1 GRAS 108 496

Links

Other GRAS family TFs
Other Populus trichocarpa TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29908.m006159 Ricinus communis 29908.m006159 N 0.839
Aquca_014_00175 Aquilegia coerulea Aquca_014_00175 N 0.804
cassava32027.m1 Manihot esculenta cassava32027.m1 N 0.828
cassava44367.m1 Manihot esculenta cassava44367.m1 N 0.850
Ca_26279 Cicer arietinum Ca_26279 N 0.771
Ciclev10000940m.g Citrus clementina Ciclev10000940m.g N 0.853
Eucgr.L03490 Eucalyptus grandis Eucgr.L03490 N 0.828
evm.TU.supercontig_36.32 Carica papaya evm.TU.supercontig_36.32 N 0.826
gene11137-v1.0-hybrid Fragaria vesca gene11137-v1.0-hybrid N 0.858
GLYMA04G43090 Glycine max GLYMA04G43090 N 0.777
GLYMA06G11610 Glycine max GLYMA06G11610 N 0.777
Gorai.009G244200 Gossypium raimondii Gorai.009G244200 N 0.793
Gorai.010G048800 Gossypium raimondii Gorai.010G048800 N 0.823
LjT15C06.70.nc Lotus japonicus LjT15C06.70.nc N 0.738
LjT26J05.10.nc Lotus japonicus LjT26J05.10.nc N 0.766
Lus10008316.g Linum usitatissimum Lus10008316.g N 0.793
Lus10028056.g Linum usitatissimum Lus10028056.g N 0.760
MDP0000319342 Malus domestica MDP0000319342 N 0.826
MDP0000884524 Malus domestica MDP0000884524 N 0.815
MTR_3g072710 Medicago truncatula MTR_3g072710 N 0.768
MTR_5g058860 Medicago truncatula MTR_5g058860 N 0.700
orange1.1g011012m.g Citrus sinensis orange1.1g011012m.g N 0.842
PGSC0003DMG400012071 Solanum tuberosum PGSC0003DMG400012071 N 0.787
Pm004863 Prunus mume Pm004863 N 0.853
POPTR_0002s08660 Populus trichocarpa POPTR_0002s08660 N 0.877
PRUPE_ppa018977mg Prunus persica PRUPE_ppa018977mg N 0.845
SapurV1A.0010s0900 Salix purpurea SapurV1A.0010s0900 N 0.863
SapurV1A.0105s0110 Salix purpurea SapurV1A.0105s0110 N 0.902
Solyc11g013150.1 Solanum lycopersicum Solyc11g013150.1 N 0.790
TCM_035069 Theobroma cacao TCM_035069 N 0.856
VIT_18s0001g03310 Vitis vinifera VIT_18s0001g03310 N 0.839