CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si016627m.g
(
Setaria italica
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Si016627m.g
T201503_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si016627m
GRAS
271
636
SRQLLSETAAAVADGNRTAAAAHLAALKTTVNPRGDAEQRLVAMMAAALSSRIGPPSSQQLAELCGPEQRAACQLLHDVSPCFGLALHGANLAILDAVAGQRAIHLIDFDVSVAQHIALIQALASRRVAGTCLKVTAVADPASPFTPALTQALAATGQRLKRHAQQAGLEFRFNAVSCRAGEIDASRLGCEPGEALAVNLAFALSRVADESVSPANPRDELLRRVRALGPRVVALVEQELNTNTAPLAARFADACAHYGAVLESLDATLARDSPQRARAEEALANKATNALAREGPDRMERCEVFGKWRARFGMAGLRPVAIGQGIADRVKARLGHARPGFDVKLDSGRLGVGWMGRVVTVASAWR
Links
Other
GRAS
family TFs
Other
Setaria italica
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA005839
Oryza indica
BGIOSGA005839
N
0.801
BGIOSGA014504
Oryza indica
BGIOSGA014504
N
0.708
BRADI5G19190
Brachypodium distachyon
BRADI5G19190
N
0.738
GRMZM2G028438
Zea mays
GRMZM2G028438
N
0.829
GRMZM2G109869
Zea mays
GRMZM2G109869
N
0.704
GRMZM2G173429
Zea mays
GRMZM2G173429
N
0.710
LPERR04G18520
Leersia perrieri
LPERR04G18520
N
0.707
OBART02G28020
Oryza barthii
OBART02G28020
N
0.804
OGLUM02G28580
Oryza glumaepatula
OGLUM02G28580
N
0.798
OGLUM04G22640
Oryza glumaepatula
OGLUM04G22640
N
0.708
OMERI02G27200
Oryza meridionalis
OMERI02G27200
N
0.807
OMERI04G19030
Oryza meridionalis
OMERI04G19030
N
0.710
ONIVA02G31120
Oryza nivara
ONIVA02G31120
N
0.801
ONIVA04G21910
Oryza nivara
ONIVA04G21910
N
0.708
OPUNC02G25720
Oryza punctata
OPUNC02G25720
N
0.801
ORGLA02G0240700
Oryza glaberrima
ORGLA02G0240700
N
0.804
ORGLA04G0197700
Oryza glaberrima
ORGLA04G0197700
N
0.708
ORUFI02G29540
Oryza rufipogon
ORUFI02G29540
N
0.804
ORUFI04G24440
Oryza rufipogon
ORUFI04G24440
N
0.708
OS02G0681900
Oryza sativa
OS02G0681900
N
0.804
OS04G0580300
Oryza sativa
OS04G0580300
N
0.708
Pavir.Aa00944
Panicum virgatum
Pavir.Aa00944
N
0.895
Pavir.Ga00626
Panicum virgatum
Pavir.Ga00626
N
0.727
Pavir.Gb01009
Panicum virgatum
Pavir.Gb01009
N
0.707
Pavir.J39953
Panicum virgatum
Pavir.J39953
N
0.909
Sb04g031770
Sorghum bicolor
Sb04g031770
N
0.858
Si009601m.g
Setaria italica
Si009601m.g
N
0.727