CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc01g100200.2
(
Solanum lycopersicum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Solyc01g100200.2
T201549_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc01g100200.2.1
GRAS
286
657
LRALLTQCAQAMANYDSRTANELLMRIREHSTPHGDGTERLAHYLANALEARLSGTGTALYTAYAPSRISAANILKAYKAFIRACPFKLLSNIFANKYIRKVIAGAPKIHIIDFGILYGFQWPCLIQGLSMRAGGPPELRITGIDLPQPGFKPAGRVEETGRRLEKYCKRFSVPFVFKAIAKKWESITLEELEVQRDEVLVVNSLYRLGNIPDETVVPNSPRDAVLNLIRRIRPDLFIHGALNGTFNTPFFVTRFREALFHFSSLYDMFEATLPREDEDRKLFEEEVFARDAMNVIACEGTERVERPETYKQWQLRCVRAGFKQVPLDQEIVKIVRNKVRSEYHRDFSVDEDGHWMLQGWKGRVIYALSCWK
Links
Other
GRAS
family TFs
Other
Solanum lycopersicum
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AB08549.1
Alternaria brassicicola
AB08549.1
I
AGABI2DRAFT_198669
Agaricus bisporus
AGABI2DRAFT_198669
I
AUEXF2481DRAFT_696292
Aureobasidium subglaciale
AUEXF2481DRAFT_696292
I
BAUCODRAFT_43903
Baudoinia compniacensis
BAUCODRAFT_43903
I
Bcin02g08650
Botrytis cinerea
Bcin02g08650
I
BN7_2094
Wickerhamomyces ciferrii
BN7_2094
I
BN946_scf184843.g9
Trametes cinnabarina
BN946_scf184843.g9
I
BOTBODRAFT_358406
Botryobasidium botryosum
BOTBODRAFT_358406
N
CC1G_08281
Coprinopsis cinerea
CC1G_08281
I
CIMG_01739
Coccidioides immitis
CIMG_01739
I
CLUG_03418
Candida lusitaniae
CLUG_03418
I
CLUG_03418
Clavispora lusitaniae
CLUG_03418
I
COCCADRAFT_103330
Bipolaris zeicola
COCCADRAFT_103330
I
COCSADRAFT_113317
Bipolaris sorokiniana
COCSADRAFT_113317
I
CPC735_047500
Coccidioides posadasii
CPC735_047500
I
CY34DRAFT_809035
Suillus luteus
CY34DRAFT_809035
I
DACRYDRAFT_23137
Dacryopinax sp
DACRYDRAFT_23137
I
DOTSEDRAFT_73261
Dothistroma septosporum
DOTSEDRAFT_73261
I
E5Q_04392
Mixia osmundae
E5Q_04392
I
estExt_fgenesh1_pg.C_60347
Sporobolomyces roseus
estExt_fgenesh1_pg.C_60347
I
estExt_fgenesh1_pg.C_chr_60498
Mycosphaerella graminicola
estExt_fgenesh1_pg.C_chr_60498
I
GALMADRAFT_1170770
Galerina marginata
GALMADRAFT_1170770
N
GALMADRAFT_118766
Galerina marginata
GALMADRAFT_118766
I
GALMADRAFT_133674
Galerina marginata
GALMADRAFT_133674
N
GALMADRAFT_238545
Galerina marginata
GALMADRAFT_238545
N
GALMADRAFT_39494
Galerina marginata
GALMADRAFT_39494
N
GALMADRAFT_439138
Galerina marginata
GALMADRAFT_439138
N
GALMADRAFT_439371
Galerina marginata
GALMADRAFT_439371
N
GALMADRAFT_55133
Galerina marginata
GALMADRAFT_55133
N
GALMADRAFT_56038
Galerina marginata
GALMADRAFT_56038
N
GALMADRAFT_709408
Galerina marginata
GALMADRAFT_709408
N
GALMADRAFT_924624
Galerina marginata
GALMADRAFT_924624
N
GGTG_05122
Gaeumannomyces graminis
GGTG_05122
I
GLOINDRAFT_14063
Rhizophagus irregularis
GLOINDRAFT_14063
I
GLOTRDRAFT_119791
Gloeophyllum trabeum
GLOTRDRAFT_119791
I
GMDG_07418
Pseudogymnoascus destructans
GMDG_07418
I
GSTUM_00000949001
Tuber melanosporum
GSTUM_00000949001
I
gww2.5.554.1
Phanerochaete chrysosporium
gww2.5.554.1
N
H102_08541
Trichophyton rubrum
H102_08541
I
H105_08570
Trichophyton soudanense
H105_08570
I
HETIRDRAFT_380701
Heterobasidion irregulare
HETIRDRAFT_380701
N
HPODL_02729
Ogataea parapolymorpha
HPODL_02729
I
J056_000339
Wallemia ichthyophaga
J056_000339
I
JAAARDRAFT_55946
Jaapia argillacea
JAAARDRAFT_55946
I
K437DRAFT_231954
Tilletiaria anomala
K437DRAFT_231954
N
K443DRAFT_103561
Laccaria amethystina
K443DRAFT_103561
N
KUCA_T00002649001
Kuraishia capsulata
KUCA_T00002649001
I
LACBIDRAFT_300067
Laccaria bicolor
LACBIDRAFT_300067
I
LEMA_P008300.1
Leptosphaeria maculans
LEMA_P008300.1
I
M404DRAFT_143892
Pisolithus tinctorius
M404DRAFT_143892
I
M404DRAFT_42467
Pisolithus tinctorius
M404DRAFT_42467
I
M407DRAFT_88338
Tulasnella calospora
M407DRAFT_88338
I
M408DRAFT_138020
Serendipita vermifera
M408DRAFT_138020
I
M413DRAFT_349844
Hebeloma cylindrosporum
M413DRAFT_349844
N
M413DRAFT_446777
Hebeloma cylindrosporum
M413DRAFT_446777
I
M422DRAFT_252354
Sphaerobolus stellatus
M422DRAFT_252354
I
M437DRAFT_71705
Aureobasidium melanogenum
M437DRAFT_71705
I
M438DRAFT_378068
Aureobasidium pullulans
M438DRAFT_378068
I
MAPG_11530
Magnaporthe poae
MAPG_11530
I
MCYG_03255
Microsporum canis
MCYG_03255
I
MELLADRAFT_78083
Melampsora laricipopulina
MELLADRAFT_78083
N
MGYG_00413
Microsporum gypseum
MGYG_00413
I
Moror_15941
Moniliophthora roreri
Moror_15941
N
MPER_08472
Moniliophthora perniciosa
MPER_08472
N
MPH_05091
Macrophomina phaseolina
MPH_05091
I
Mycgr3G109990
Zymoseptoria tritici
Mycgr3G109990
I
NCAS_0A06450
Naumovozyma castellii
NCAS_0A06450
I
PAN0_006c2853
Pseudozyma antarctica
PAN0_006c2853
I
PAXRUDRAFT_831203
Paxillus rubicundulus
PAXRUDRAFT_831203
I
PFL1_05463
Pseudozyma flocculosa
PFL1_05463
N
PGUG_02177
Candida guilliermondii
PGUG_02177
I
PGUG_02177
Meyerozyma guilliermondii
PGUG_02177
I
PHACADRAFT_119777
Phanerochaete carnosa
PHACADRAFT_119777
I
PHLGIDRAFT_123599
Phlebiopsis gigantea
PHLGIDRAFT_123599
I
PHSY_006817
Pseudozyma hubeiensis
PHSY_006817
I
PIIN_00347
Piriformospora indica
PIIN_00347
N
PILCRDRAFT_82281
Piloderma croceum
PILCRDRAFT_82281
N
PLEOSDRAFT_1087686
Pleurotus ostreatus
PLEOSDRAFT_1087686
I
PMAA_079170
Talaromyces marneffei
PMAA_079170
I
PMAA_079170
Penicillium marneffei
PMAA_079170
I
POSPLDRAFT_38710
Postia placenta
POSPLDRAFT_38710
N
PSEUBRA_SCAF7g04459
Pseudozyma brasiliensis
PSEUBRA_SCAF7g04459
I
PTT_13287
Pyrenophora teres
PTT_13287
I
PV09_03463
Verruconis gallopava
PV09_03463
I
PVAR5_3450
Byssochlamys spectabilis
PVAR5_3450
I
RHTO_03255
Rhodosporidium toruloides
RHTO_03255
I
SAKL0B12408g
Lachancea kluyveri
SAKL0B12408g
I
SBOR_2785
Sclerotinia borealis
SBOR_2785
I
Scas_Contig703.4
Saccharomyces castellii
Scas_Contig703.4
I
SCHCODRAFT_65208
Schizophyllum commune
SCHCODRAFT_65208
I
SEPMUDRAFT_149100
Sphaerulina musiva
SEPMUDRAFT_149100
I
SPAPADRAFT_61025
Spathaspora passalidarum
SPAPADRAFT_61025
I
sr14344
Sporisorium reilianum
sr14344
N
TESG_01010
Trichophyton tonsurans
TESG_01010
I
TSTA_113620
Talaromyces stipitatus
TSTA_113620
I
UCRNP2_5191
Neofusicoccum parvum
UCRNP2_5191
I
UHOR_05198
Ustilago hordei
UHOR_05198
I
UREG_05447
Uncinocarpus reesii
UREG_05447
I
V499_02747
Pseudogymnoascus pannorum
V499_02747
I
V565_131540
Rhizoctonia solani
V565_131540
I
W97_07443
Coniosporium apollinis
W97_07443
I
WALSEDRAFT_64781
Wallemia sebi
WALSEDRAFT_64781
I