CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Solyc09g010920.1
(
Solanum lycopersicum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Solyc09g010920.1
T201579_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc09g010920.1.1
GRAS
387
759
LRTLMINCAQAVAADDSRIANELLKQIRQHSSPFGDGNQRLAHCFADGLEARLAGTGSQIYKALVNKRTSAADLLKAYHLYLASSPFRKISSFASNKTIMLKAENATRVHVIDFGILYGFQWPTFIQRIAEREGGPPRLRITGIEFPQPGFRPAERIEETGRRLADYARSFNVPFEYHAIAKKWESITVEDLKLDKDEFLAVNCLYRFKNLHDETIAVESSRTIVLNLVRKINPDIFVHGIVNGAYSAPFFVTRFREALFHFSALFDILETIVPREIPERRLIEREIFGREALNVIACEGWERVERPETYKQWQARIMGARFTQIPFDREEFVNKAIEKVRLGYHRDFVIDEDSQWLLLGWKGRTIYALSCWK
Links
Other
GRAS
family TFs
Other
Solanum lycopersicum
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MLOC_43730
Hordeum vulgare
MLOC_43730
N
OB11G28110
Oryza brachyantha
OB11G28110
N
Pavir.J35282
Panicum virgatum
Pavir.J35282
N
Sb05g027786
Sorghum bicolor
Sb05g027786
N
Traes_4AL_F023A8691
Triticum aestivum
Traes_4AL_F023A8691
N
Traes_4DS_050789E2A
Triticum aestivum
Traes_4DS_050789E2A
N
Traes_4DS_82065CB2C
Triticum aestivum
Traes_4DS_82065CB2C
N