CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava1376.valid.m1
(
Manihot esculenta
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
cassava1376.valid.m1
T202044_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava1376.valid.m1
GRAS
46
470
LIHLLLACANHVAAGSVENANISLEQISHLASADGDTMQRIAAYFTEALADRILRKGWPGLHRALTFTKKSLVSEELLVQRLFFELFPFLKLAYVITNQAIIEAMEGEKMVHIIDLNSFEPAQWIDLLQTLSARPEGPPHLRITGIHEQKEVLDQMALRLTEEAEKLDIPFQFNPIVSKLEDLDIESLRVKTGEALAVSSVLQLHSLLAVDDEILKGNSPSASKNPNPSHFQRALQINKNKRTLGELLEKDLVHVYGASPDSALSPLSLAPSPKMGSFLSALWGLSPKLMVITEQESNHNGFTLMERVTEALNFYAALFDCLESTVSRASVERQKVEKMLFGEEIKNIIACEGTDRKERHEKLEKWILRLELAGFGRVPLSYHGILQASRLLQSYGYDGYKIKEENGCLVICWHSRPLFSVSAWR
Links
Other
GRAS
family TFs
Other
Manihot esculenta
TFs
66 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
14441_Multiple
Saccharomyces mikatae
14441_Multiple
I
0.000
14775_YLR014C
Saccharomyces paradoxus
14775_YLR014C
I
0.000
15669_YLR014C
Saccharomyces bayanus
15669_YLR014C
I
0.000
CaO19.11469
Candida albicans
CaO19.11469
N
0.000
CaO19.3986
Candida albicans
CaO19.3986
N
0.000
CD36_54570
Candida dubliniensis
CD36_54570
N
0.000
CORT_0F01630
Candida orthopsilosis
CORT_0F01630
N
0.000
CPAG_00496
Candida parapsilosis
CPAG_00496
N
0.000
G210_1640
Candida maltosa
G210_1640
N
0.000
KNAG_0B05120
Kazachstania naganishii
KNAG_0B05120
N
0.000
LALA0_S04e07426g
Lachancea lanzarotensis
LALA0_S04e07426g
I
0.000
NCAS_0D02540
Naumovozyma castellii
NCAS_0D02540
I
0.000
NDAI_0I02350
Naumovozyma dairenensis
NDAI_0I02350
I
0.000
PPR1
Saccharomyces cerevisiae
YLR014C
D
0.000
Scas_Contig521.2
Saccharomyces castellii
Scas_Contig521.2
I
0.000
SKUD_202511
Saccharomyces kudriavzevii
SKUD_202511
I
0.000
TDEL_0E03910
Torulaspora delbrueckii
TDEL_0E03910
I
0.000
ZBAI_04454
Zygosaccharomyces bailii
ZBAI_04454
N
0.000
ZBAI_06510
Zygosaccharomyces bailii
ZBAI_06510
N
0.000
ZYRO0A10956g
Zygosaccharomyces rouxii
ZYRO0A10956g
N
0.000