CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.26527s0463
(
Boechera stricta
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Bostr.26527s0463
T202285_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RGL2
M02031_2.00
Arabidopsis thaliana
NGTACGGHN
NDCCGTACN
PBM
Weirauch et al.(2014)
pTH8681
0.771
0.771
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.26527s0463.1.p
GRAS
164
523
LVQALVACAEAVQQGNLSLADALVKRVGSLAASQAGAMGKVATYFAEALARRIYRIHPSSASIDPFFEEILQMNFYDSSPYLKFAHFTANQAILEAVTMARGVHVIDLGLNQGMQWPALMQALALRPGGPPSFRLTGVGAPSNREGIQELGSKLTQLAQAIGVEFEFSGVTTEKLSDLEPDMFETRPESETLVVNSVFELHPVLCRPGSIEKLLATVKAVKPSIVTVVEQEANHNGVVFLERFNEALHYYSSLFDSLEDRVVIPSQDRVMSEVYLGRQILNVVAAEGIDRIERHETLAQWRKRMGSAGFDPVNLGSHAFKQASLLLALFGSGDGYRVEESDGSLMLAWQMKPLIAASAWK
Links
Other
GRAS
family TFs
Other
Boechera stricta
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O7_07585
Cladophialophora yegresii
A1O7_07585
N
0.000
ACRE_059070
Acremonium chrysogenum
ACRE_059070
N
0.000
AUEXF2481DRAFT_45076
Aureobasidium subglaciale
AUEXF2481DRAFT_45076
N
0.000
Bcin05g01950
Botrytis cinerea
Bcin05g01950
I
0.000
CFIO01_06749
Colletotrichum fioriniae
CFIO01_06749
N
0.000
CH063_08532
Colletotrichum higginsianum
CH063_08532
N
0.000
Cob_11580
Colletotrichum orbiculare
Cob_11580
N
0.000
CSUB01_09245
Colletotrichum sublineola
CSUB01_09245
N
0.000
F503_07317
Ophiostoma piceae uamh
F503_07317
N
0.000
FFUJ_00463
Fusarium fujikuroi
FFUJ_00463
N
0.000
FGRRES_00774
Fusarium graminearum
FGRRES_00774
N
0.000
FOXG_01108
Fusarium oxysporum
FOXG_01108
N
0.000
FPSE_09241
Fusarium pseudograminearum
FPSE_09241
N
0.000
FVEG_00406
Fusarium verticillioides
FVEG_00406
N
0.000
GLRG_00869
Colletotrichum graminicola
GLRG_00869
N
0.000
MAC_05470
Metarhizium acridum
MAC_05470
N
0.000
MAJ_05894
Metarhizium majus
MAJ_05894
N
0.000
MANI_022808
Metarhizium anisopliae
MANI_022808
N
0.000
MBR_00131
Metarhizium brunneum
MBR_00131
N
0.000
MGU_09468
Metarhizium guizhouense
MGU_09468
N
0.000
NechaG98980
Fusarium solani
NechaG98980
N
0.000
OIDMADRAFT_106905
Oidiodendron maius
OIDMADRAFT_106905
I
0.000
OIDMADRAFT_125400
Oidiodendron maius
OIDMADRAFT_125400
N
0.000
OIDMADRAFT_132235
Oidiodendron maius
OIDMADRAFT_132235
N
0.000
OIDMADRAFT_43237
Oidiodendron maius
OIDMADRAFT_43237
N
0.000
PEX1_002100
Penicillium expansum
PEX1_002100
N
0.000
PFICI_10838
Pestalotiopsis fici
PFICI_10838
N
0.000
PFICI_13498
Pestalotiopsis fici
PFICI_13498
N
0.000
PFICI_13949
Pestalotiopsis fici
PFICI_13949
N
0.000
PMAA_076190
Penicillium marneffei
PMAA_076190
N
0.000
PMAA_076190
Talaromyces marneffei
PMAA_076190
N
0.000
PV06_02513
Exophiala oligosperma
PV06_02513
N
0.000
PV10_00327
Exophiala mesophila
PV10_00327
N
0.000
TRIATDRAFT_291139
Trichoderma atroviride
TRIATDRAFT_291139
N
0.000
TRIATDRAFT_54121
Trichoderma atroviride
TRIATDRAFT_54121
N
0.000
TRIVIDRAFT_59868
Trichoderma virens
TRIVIDRAFT_59868
N
0.000
TSTA_096540
Talaromyces stipitatus
TSTA_096540
N
0.000
UCREL1_8439
Eutypa lata
UCREL1_8439
N
0.000
UCRPA7_8834
Togninia minima
UCRPA7_8834
N
0.000
X797_002486
Metarhizium robertsii
X797_002486
N
0.000