CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.0448s0009
(
Capsella grandiflora
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Cagra.0448s0009
T202310_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.0448s0009.1.p
GRAS
216
586
MRDLLMQCAQAVASFDQFRAFEKLKEIREHSSIRGDATQRLGYHLAEALEARLTGTMSTPISATYSITSMVDILKAYKGFVQACPTLRMCYFTANRTIFELAPKATTLHIIDFGILYGFQWPCLIKALSNREGGPPLLRVTGIELPQSGFRPSERVQETGKRLKRFCDKFKVPFEYSYIAKKWEDITLDELVINTGETTVVNCILRLQYTPDETITLNSPRDTVLKLFRDINPNLFVFAEINGTYNSPFFLTRFREALFHCSALFDMYETTLPEEDDCRTHVERELIVRDAMSVVACEGSERFARPETYKQWQVRILRAGFKPAKLNKLIVKEGKELVKQRYHKDFVIDNDNHWLLQGWKGKILYAVSCWK
Links
Other
GRAS
family TFs
Other
Capsella grandiflora
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pm022530
Prunus mume
Pm022530
N
PRUPE_ppa006028mg
Prunus persica
PRUPE_ppa006028mg
N