CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.3264s0006
(
Capsella grandiflora
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Cagra.3264s0006
T202328_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.3264s0006.1.p
GRAS
339
713
LRTMLVSCAQAVSINDRRTADDLLSRIRQHSSSYGDGTERLAHYFANSLEARLAGIGTQVYTALSSKKTSASDMLKAYQTYISVCPFKKIAIIFANHSIMQLASIANTKTIHIIDFGISYGFQWPSLIHRLAWRRGSSCKLRITGIELPQRGFRPAEGVIETGHRLAKYCEKFHIPFEYNAIAQKWETIKLEDLKLKEGEFVAVNSLFRFRNLLDETVAVHSPRDAVLKLIRKIKPDVFMPGILSGSYNAPFFVTRFREVLFHYSSLFDMCDTNLAREDPMRLMFEKEFYGREIMNVVACEGTERVERPESYKQWQARAMRAGFRQIPLEKDLVQKLKLLVENGYKTKEFDVDQDCNWLLQGWKGRIVYASSVWV
Links
Other
GRAS
family TFs
Other
Capsella grandiflora
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_08152
Capronia coronata
A1O1_08152
I
A1O9_07504
Exophiala aquamarina
A1O9_07504
I
GSTUM_00002384001
Tuber melanosporum
GSTUM_00002384001
I
HCBG_03332
Histoplasma capsulatum
HCBG_03332
D
HMPREF1120_04213
Exophiala dermatitidis
HMPREF1120_04213
I
HMPREF1541_10248
Cyphellophora europaea
HMPREF1541_10248
I
MPH_11572
Macrophomina phaseolina
MPH_11572
I
PMAA_042150
Penicillium marneffei
PMAA_042150
I
PV05_08058
Exophiala xenobiotica
PV05_08058
I
PV06_10014
Exophiala oligosperma
PV06_10014
I
PV08_08586
Exophiala spinifera
PV08_08586
I
PV10_08405
Exophiala mesophila
PV10_08405
I
PV11_06579
Exophiala sideris
PV11_06579
I
TSTA_076400
Talaromyces stipitatus
TSTA_076400
N
UCRNP2_7184
Neofusicoccum parvum
UCRNP2_7184
I
Z518_05550
Rhinocladiella mackenziei
Z518_05550
I