CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.7055s0004
(
Capsella grandiflora
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Cagra.7055s0004
T202337_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.7055s0004.1.p
GRAS
161
531
LKGVLYECAKAVENCDVDLTDWLVSQLQQMVSVSGEPVQRLGAYMLEGLVARLASSGSSIYKALRCKDPTGPELLTYMHILYEACPYFKFGYESANGAIAEAVKNESFVHIIDFQISQGGQWVSLIRALGARPGGPPKVRITGIDDPRSSFARQGGLELVGQRLGKLAEMCGVPFEFHGAALCCTEVEIEKLGVRNGEALAVNFPLVLHHMPDEGVTVENHRDRLLRLVKHLSPNVVTLVEQEANTNTAPFLPRFVETMNHYLAVFESIDVKLARNHKERINVEQHCLAREVVNLIACEGVEREERHEPLGKWRSRFHMAGFKPYPLSSYVNATIKGLLESYSEKYTLEESDGALYLGWKNQPLITSCAWR
Links
Other
GRAS
family TFs
Other
Capsella grandiflora
TFs
58 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1Q1_01999
Trichosporon asahii
A1Q1_01999
N
AGABI2DRAFT_197789
Agaricus bisporus
AGABI2DRAFT_197789
N
BN946_scf185001.g47
Trametes cinnabarina
BN946_scf185001.g47
N
BOTBODRAFT_112907
Botryobasidium botryosum
BOTBODRAFT_112907
N
BOTBODRAFT_27262
Botryobasidium botryosum
BOTBODRAFT_27262
N
CC1G_03731
Coprinopsis cinerea
CC1G_03731
N
CERSUDRAFT_109864
Ceriporiopsis subvermispora
CERSUDRAFT_109864
N
CY34DRAFT_31562
Suillus luteus
CY34DRAFT_31562
N
DICSQDRAFT_14849
Dichomitus squalens
DICSQDRAFT_14849
N
e_gww2.7.722.1
Phanerochaete chrysosporium
e_gww2.7.722.1
N
FOMPIDRAFT_1033652
Fomitopsis pinicola
FOMPIDRAFT_1033652
N
FOMPIDRAFT_1085863
Fomitopsis pinicola
FOMPIDRAFT_1085863
N
GALMADRAFT_233958
Galerina marginata
GALMADRAFT_233958
N
GLOTRDRAFT_26554
Gloeophyllum trabeum
GLOTRDRAFT_26554
N
gw1.1.1202.1
Heterobasidion annosum
gw1.1.1202.1
N
gw1.8.218.1
Tremella mesenterica
gw1.8.218.1
N
HETIRDRAFT_181137
Heterobasidion irregulare
HETIRDRAFT_181137
N
JAAARDRAFT_209121
Jaapia argillacea
JAAARDRAFT_209121
N
K443DRAFT_676063
Laccaria amethystina
K443DRAFT_676063
N
LACBIDRAFT_300881
Laccaria bicolor
LACBIDRAFT_300881
N
M378DRAFT_155533
Amanita muscaria
M378DRAFT_155533
N
M404DRAFT_998133
Pisolithus tinctorius
M404DRAFT_998133
N
M413DRAFT_216932
Hebeloma cylindrosporum
M413DRAFT_216932
N
Moror_1174
Moniliophthora roreri
Moror_1174
N
Moror_346
Moniliophthora roreri
Moror_346
N
PAXRUDRAFT_15625
Paxillus rubicundulus
PAXRUDRAFT_15625
N
PHACADRAFT_83199
Phanerochaete carnosa
PHACADRAFT_83199
N
PHLGIDRAFT_451232
Phlebiopsis gigantea
PHLGIDRAFT_451232
N
PIIN_04027
Piriformospora indica
PIIN_04027
N
PISMIDRAFT_283095
Pisolithus microcarpus
PISMIDRAFT_283095
N
SCHCODRAFT_269947
Schizophyllum commune
SCHCODRAFT_269947
N
SCHCODRAFT_86194
Schizophyllum commune
SCHCODRAFT_86194
N
SCLCIDRAFT_1225180
Scleroderma citrinum
SCLCIDRAFT_1225180
N
SERLA73DRAFT_176212
Serpula lacrymans
SERLA73DRAFT_176212
N
SERLA73DRAFT_66208
Serpula lacrymans
SERLA73DRAFT_66208
N