CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.9501s0015
(
Capsella grandiflora
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Cagra.9501s0015
T202338_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.9501s0015.1.p
GRAS
256
632
LVNLITGCLEAIRSRNIAAINHFIARTGDLSSPRGRTPMTRLIAYYIEALALRVAHIFHIAPPREFDRTVEDESGNALRFLNQVTPIPKFIHFTANEMLLRAFEGKERVHIIDFDIKQGLQWPSFFQSLASRTNPPHHVRITGIGESKLELNETGDRLHGFAEAMNLQFEFHPVVDRLEDVRLWMLHVKEGESVAVNCVMQMHKTLYDGTGAAIRDFLGLIRSTNPVALVLAEQEAEHNSEQLETRVCNSLKYYSAMFDAIHTNLATDSLIRVKIEEMLFGREIRNIVACEGSHRQERHVGFRHWRRMLEQLGFRSLGVSEREVLQSKMLLRMYGSGNEGFFNVERRDEDGGAEGGRGGGVTLRWSEQPLYTISAWT
Links
Other
GRAS
family TFs
Other
Capsella grandiflora
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBG19060
Caenorhabditis briggsae
CBG19060
N
CRE08643
Caenorhabditis remanei
CRE08643
N
CRE18739
Caenorhabditis remanei
CRE18739
N
CRE18740
Caenorhabditis remanei
CRE18740
N
CRE27297
Caenorhabditis remanei
CRE27297
N
nhr-107
Caenorhabditis elegans
WBGene00003697
N
nhr-139
Caenorhabditis elegans
WBGene00016365
N