CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10013509m.g
(
Capsella rubella
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Carubv10013509m.g
T202353_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10013509m
GRAS
130
499
FVEDLIRVVNCVDSDELQLAQVILSRLNQRLRSPTGRPLERAAFYFKEALGSLITGTNRNQNRLSSWSEIVQKIRAVKEFSGVSPIPLFSHFTANQTILDSLTVRSSSPPYAHVVDFEIGFGGQYASLMREIAEKSVNGIGFLRVTAVVTEDSAVETRLVKENLAQFAADLKIRFQIEFVLMRTFEVLSFKAVRFVEGERTVVLLSPVIFRRLNGISGFVNDLRRVSPKVVVFVDSEGWTGISGGAGSFQREFVSGLEFYTMVFESLDAAVASPGGGDLVKKIIEAFVLRPKIASAVEAGADKRGGEMMTWREAFCAAGMRMVPLSQFVDFQAECLVEKAQVRGFHVAKRQGELMLCWHERSLVATSAWR
Links
Other
GRAS
family TFs
Other
Capsella rubella
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CG13204
Drosophila melanogaster
FBgn0033627
N
GA24236
Drosophila pseudoobscura
FBgn0245635
N
GD10794
Drosophila simulans
FBgn0182557
N
GF12551
Drosophila ananassae
FBgn0089588
N
GG20199
Drosophila erecta
FBgn0112390
N
GH21384
Drosophila grimshawi
FBgn0128846
N
GI18561
Drosophila mojavensis
FBgn0141300
N
GJ20354
Drosophila virilis
FBgn0207494
N
GK23098
Drosophila willistoni
FBgn0225060
N
GL10401
Drosophila persimilis
FBgn0148011
N
GL11688
Drosophila persimilis
FBgn0149297
N
GM21286
Drosophila sechellia
FBgn0176167
N
LCUP002174
Lucilia cuprina
LCUP002174
N
MDOA003080
Musca domestica
MDOA003080
N