CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10006534m.g
(
Citrus clementina
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Ciclev10006534m.g
T202380_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10006534m
GRAS
55
426
LVHLLLLSAEKIGSQQFDRASIFLDHVDKYSSTTGNPVQRLVHYFSKALRERFNLETGRITSKGLKSEEVMLLLHPEEVMASAKQALIACYQKVPFYQVTVFAGIQAVIENVSSAKTIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTSSKQKFEEIENRLANFAETINLPFPFNISFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTELRKINPCVMVVIEVESNDNLQTFEDRFFGTLFHFGALFDCLEVCMNRCHANRMTFEEMYAGQHIRNIIASEGEERIFGHMKIDGWRDLFNRFGLVEAELSSWSLFQAELILRSFACGSSCTIDRNGECLIIGWKGIPHLSLSVWK
Links
Other
GRAS
family TFs
Other
Citrus clementina
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bm3808
Brugia malayi
Bm3808
N
DME_0000439801
Dracunculus medinensis
DME_0000439801
N
LOAG_03478
Loa loa
LOAG_03478
N
nAv.1.0.1.g07097
Acanthocheilonema viteae
nAv.1.0.1.g07097
N
nLs.2.1.2.g00575
Litomosoides sigmodontis
nLs.2.1.2.g00575
N
nOo.2.0.1.g02280
Onchocerca ochengi
nOo.2.0.1.g02280
N
PTRK_0000973000
Parastrongyloides trichosuri
PTRK_0000973000
N
RSKR_0000315400
Rhabditophanes kr3021
RSKR_0000315400
N
SSTP_0000205000
Strongyloides stercoralis
SSTP_0000205000
N
SVE_0601000
Strongyloides venezuelensis
SVE_0601000
N