CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10014811m.g
(
Citrus clementina
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Ciclev10014811m.g
T202392_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10014811m
GRAS
177
547
LKQVLIFCAQAVSDGDISTAAGLMRVLEQMVSVSGEPIERLGAYMLEGLRARLEFSGSKIYKALKCEQPVSSELMSYMSVLFQICPYWKFAYMSANVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFHDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESKTNTSPFFHRFLETLDYYTAMFESIDVTRPRDDKQRISAEQHCVARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDYDSNYRVEENDGALYLGWRNRAMATSSAWK
Ciclev10014813m
GRAS
177
547
LKQVLIFCAQAVSDGDISTAAGLMRVLEQMVSVSGEPIERLGAYMLEGLRARLEFSGSKIYKALKCEQPVSSELMSYMSVLFQICPYWKFAYMSANVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFHDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESKTNTSPFFHRFLETLDYYTAMFESIDVTRPRDDKQRISAEQHCVARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDYDSNYRVEENDGALYLGWRNRAMATSSAWK
Links
Other
GRAS
family TFs
Other
Citrus clementina
TFs
39 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R000489
Calypte anna
Aan_R000489
N
0.000
Afo_R015331
Aptenodytes forsteri
Afo_R015331
N
0.000
Alligator_sinensis_CCG002326.1
Alligator sinensis
Alligator_sinensis_CCG002326.1
N
0.000
Brh_R003353
Buceros rhinoceros
Brh_R003353
N
0.000
CGI_10017105
Crassostrea gigas
CGI_10017105
N
0.000
DMTF1
Macaca mulatta
ENSMMUG00000010781
N
0.000
DMTF1
Anolis carolinensis
ENSACAG00000001448
N
0.000
DMTF1
Monodelphis domestica
ENSMODG00000016953
N
0.000
Dmtf1
Mus musculus
ENSMUSG00000042508
N
0.000
DMTF1
Ornithorhynchus anatinus
ENSOANG00000015391
N
0.000
DMTF1
Oryctolagus cuniculus
ENSOCUG00000009179
N
0.000
DMTF1
Otolemur garnettii
ENSOGAG00000000022
N
0.000
DMTF1
Procavia capensis
ENSPCAG00000014639
N
0.000
DMTF1
Pan troglodytes
ENSPTRG00000019364
N
0.000
DMTF1
Pteropus vampyrus
ENSPVAG00000007410
N
0.000
Dmtf1
Rattus norvegicus
ENSRNOG00000005908
N
0.000
DMTF1
Sorex araneus
ENSSARG00000002410
N
0.000
DMTF1
Sus scrofa
ENSSSCG00000015393
N
0.000
DMTF1
Taeniopygia guttata
ENSTGUG00000002365
N
0.000
dmtf1
Tetraodon nigroviridis
ENSTNIG00000018722
N
0.000
DMTF1
Tursiops truncatus
ENSTTRG00000006785
N
0.000
DMTF1
Vicugna pacos
ENSVPAG00000009890
N
0.000
DMTF1
Meleagris gallopavo
ENSMGAG00000005151
N
0.000
DMTF1
Bos taurus
ENSBTAG00000020878
N
0.000
DMTF1
Canis familiaris
ENSCAFG00000001819
N
0.000
DMTF1
Callithrix jacchus
ENSCJAG00000014730
N
0.000
DMTF1
Cavia porcellus
ENSCPOG00000002780
N
0.000
dmtf1
Danio rerio
ENSDARG00000025824
N
0.000
DMTF1
Myotis lucifugus
ENSMLUG00000017083
N
0.000
DMTF1
Equus caballus
ENSECAG00000020746
N
0.000
DMTF1
Erinaceus europaeus
ENSEEUG00000012844
N
0.000
DMTF1
Echinops telfairi
ENSETEG00000018444
N
0.000
DMTF1
Felis catus
ENSFCAG00000013756
N
0.000
DMTF1
Loxodonta africana
ENSLAFG00000004637
N
0.000
DMTF1
Homo sapiens
ENSG00000135164
N
0.000
DMTF1
Gorilla gorilla
ENSGGOG00000002781
N
0.000
ENSAMEG00000000861
Ailuropoda melanoleuca
ENSAMEG00000000861
N
0.000
ENSAPLG00000009042
Anas platyrhynchos
ENSAPLG00000009042
N
0.000
ENSCSAG00000012356
Chlorocebus sabaeus
ENSCSAG00000012356
N
0.000
ENSDORG00000010983
Dipodomys ordii
ENSDORG00000010983
N
0.000
ENSFALG00000001933
Ficedula albicollis
ENSFALG00000001933
N
0.000
ENSGALG00000006628
Gallus gallus
ENSGALG00000006628
N
0.000
ENSLACG00000013017
Latimeria chalumnae
ENSLACG00000013017
N
0.000
ENSMPUG00000018305
Mustela putorius furo
ENSMPUG00000018305
N
0.000
ENSNLEG00000014921
Nomascus leucogenys
ENSNLEG00000014921
N
0.000
ENSOARG00000014574
Ovis aries
ENSOARG00000014574
N
0.000
ENSONIG00000009949
Oreochromis niloticus
ENSONIG00000009949
N
0.000
ENSP00000332171
Macaca fascicularis
ENSP00000332171
N
0.000
ENSPANG00000011083
Papio anubis
ENSPANG00000011083
N
0.000
ENSPMAG00000004094
Petromyzon marinus
ENSPMAG00000004094
N
0.000
ENSPPYG00000017849
Pongo abelii
ENSPPYG00000017849
N
0.000
ENSPSIG00000016443
Pelodiscus sinensis
ENSPSIG00000016443
N
0.000
ENSSHAG00000018587
Sarcophilus harrisii
ENSSHAG00000018587
N
0.000
ENSSTOG00000010351
Ictidomys tridecemlineatus
ENSSTOG00000010351
N
0.000
Gfo_R011500
Geospiza fortis
Gfo_R011500
N
0.000
Myotis_brandtii_DMTF1_10006608
Myotis brandtii
Myotis_brandtii_DMTF1_10006608
N
0.000
NEMVEDRAFT_v1g22981
Nematostella vectensis
NEMVEDRAFT_v1g22981
N
0.000
Ogr14649
Ophisaurus gracilis
Ogr14649
N
0.000
Pvit_19395
Pogona vitticeps
Pvit_19395
N
0.000
Sakowv30027682m.g
Saccoglossus kowalevskii
Sakowv30027682m.g
N
0.000
SMAR006666
Strigamia maritima
SMAR006666
N
0.000
Tal_R002829
Tyto alba
Tal_R002829
N
0.000
XP_002935299
Xenopus tropicalis
XP_002935299
N
0.000