CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_34.30
(
Carica papaya
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
evm.TU.supercontig_34.30
T202525_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_34.30
GRAS
166
537
LVHLLLACAEAVGCRDTKLADSILAQIWSSATLMGDSLQRVSYCFAMGLKSRLSLLQTVTANGTFTNGGNHVCWVTMEEKMEAFHLLYQTTPFIAFGFMAANEAICQATQGKYSLHIIDLGMEHTLQWPSLIRNLASRPEGPPKKLKITAIINDQYRIELEGSTKLLVEEANSLGIPLEIYMISEPATPTLMTREKLGLEEGEALLVNSIMHLHKYVKESRGSLKAILQAIKKLSPTLLTVVEQDANHNGPFFLGRFLESLHYYSAIFDSLEASLLRNSPQRMKIEKYHFAEEIRNIVAYEGLDRVERHERADQWRRQLGRAGYQVMGLKCLSQARMMLSVYGCDGYTLSCEKGCLLLGWKGRPIMLASAWQ
Links
Other
GRAS
family TFs
Other
Carica papaya
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AALB000828
Anopheles albimanus
AALB000828
N
AATE015541
Anopheles atroparvus
AATE015541
N
ACEP17922
Atta cephalotes
ACEP17922
N
ACHR006139
Anopheles christyi
ACHR006139
N
ACOM026850
Anopheles coluzzii
ACOM026850
N
ADAC009779
Anopheles darlingi
ADAC009779
N
ADIR005150
Anopheles dirus
ADIR005150
N
AEPI001316
Anopheles epiroticus
AEPI001316
N
AFAF000174
Anopheles farauti
AFAF000174
N
AFUN008391
Anopheles funestus
AFUN008391
N
AGAP009806
Anopheles gambiae
AGAP009806
N
AMAM022159
Anopheles maculatus
AMAM022159
N
AMEC017406
Anopheles melas
AMEC017406
N
AMEM010054
Anopheles merus
AMEM010054
N
AMIN009538
Anopheles minimus
AMIN009538
N
GD21641
Drosophila simulans
FBgn0193065
N
GI17432
Drosophila mojavensis
FBgn0140176
N
GJ18379
Drosophila virilis
FBgn0205538
N
Hsal_06758--XP_394429.3_APIME
Harpegnathos saltator
Hsal_06758--XP_394429.3_APIME
N
NV11070
Nasonia vitripennis
NV11070
N
SINV18500
Solenopsis invicta
SINV18500
N