CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
gene01184-v1.0-hybrid
(
Fragaria vesca
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
gene01184-v1.0-hybrid
T202548_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna01184.1-v1.0-hybrid
GRAS
57
454
ARQLLIRCAELISQLDFSSAHGLISILASSNYSPHGDSTERLVHQFVRALSLRLPPVAAAPPDMARVAAATGTSAASTSSALSLEVETEAEEETLQSCYLTLNQITPFIRFSHLTANQAILEAIDSSHHAIHILDFDIKHGVQWPPLMQALVERSYGSSSSPPPLLRITATGRDLTLLRRTGERLLRFAQSLGLTFHFRPIVLLNDVAMIDYLNPASLGLFPNEALAVNCVLYLHRLLTDDARDLHLFLDKIRALNPKIVTVAEREANHNSPMFLNRFVEAVDHYGAVFGSLEATLPPNSRERLAVEQMWFGREIADVVAADDDQGRKQLRHERYENWEMMMRRSGFSNVPLSPFALSQAKLLLRLHYPSEGYQLHSLKDSFFLGWMNRPLFSVSSWN
Links
Other
GRAS
family TFs
Other
Fragaria vesca
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo1g003500
Brassica oleracea
Bo1g003500
N
Bo7g118650
Brassica oleracea
Bo7g118650
N
Bostr.7867s1625
Boechera stricta
Bostr.7867s1625
N
Bra010606
Brassica rapa
Bra010606
N
Bra011777
Brassica rapa
Bra011777
N
Bra017842
Brassica rapa
Bra017842
N
Carubv10004568m.g
Capsella rubella
Carubv10004568m.g
N
SHR
Arabidopsis thaliana
AT4G37650
N
SHR
Arabidopsis lyrata
scaffold_700314.1
N
Thhalv10024885m.g
Eutrema salsugineum
Thhalv10024885m.g
N