CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene18499-v1.0-hybrid
(
Fragaria vesca
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
gene18499-v1.0-hybrid
T202569_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna18499.1-v1.0-hybrid
GRAS
162
533
LVHMLLACAEAVGCRDTRLAESLLTQIWASVSPFGDSLQRVSYCFAMGLKSRLSLLQNVNLNGTFNNDTMDVSMIAREEKLEAFQLLYQTTPYIAFGFMVANEAICQAAQGKESLHIIDLGMEHTLQWPSLLRTLASRPEGPPKKLRITGLVEDDNVFELEAGMRVLVEEASSLGIPMEFNMISEPVKPSLLTKENLDLREGEALCVNSIMHLHRYVRESRGSLKAILQALKKLSPSVLTLVEQDANHNGPFFLGRFLESLHFYSAIFDSLEVSLPRNSPQRTKIERLHFADEIRNIVAFEGLNRVERHERADQWRRQLGRAGFQVMGLKCTSQARMMLSVYGCDGYSLASEKGCLLLGWKGRPIMLAAAWQ
Links
Other
GRAS
family TFs
Other
Fragaria vesca
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
e_gw1.40.162.1
Nectria haematococca
e_gw1.40.162.1
N
FGRRES_04862
Fusarium graminearum
FGRRES_04862
N
GLRG_08625
Colletotrichum graminicola
GLRG_08625
N
MAJ_05659
Metarhizium majus
MAJ_05659
N
MGU_07366
Metarhizium guizhouense
MGU_07366
N
NechaG52907
Fusarium solani
NechaG52907
N
OIDMADRAFT_170284
Oidiodendron maius
OIDMADRAFT_170284
N
S40285_03321
Stachybotrys chlorohalonata
S40285_03321
N
TRIVIDRAFT_28818
Trichoderma virens
TRIVIDRAFT_28818
N
VHEMI02167
Torrubiella hemipterigena
VHEMI02167
N
VHEMI10245
Torrubiella hemipterigena
VHEMI10245
N
Z519_10035
Cladophialophora bantiana
Z519_10035
N