CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene31749-v1.0-hybrid
(
Fragaria vesca
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
gene31749-v1.0-hybrid
T202595_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna31749.1-v1.0-hybrid
GRAS
645
1009
LLDQLYKAAEMVGTGNFSHAQAILARLNHQLSPVGKPLQRAAFYFKEALQLLLLMNNPATSPPPRTPTPFDVIFKMGAYKVFSEVSPLIQFVNFTCNQALLEAVSEADQIHIVDFDIGFGAHWASFMQELPLRNRGGTSPSLKITAFASPSTHHTVELSLMRDNLTQFADEIGIGFELEVVNIDLLDQNSYSLPFFRANDNEAVAVNFPIWSSSNQPAALPNLLRFVKQLSPKIVVSLDRGCDRSDLPFPQHILQALQSYINLLESLDAVNVTSDAVNKIERFLLQPKIESTVLGRLRTPDKMPLWKTLFASAGFTPLSFSNFTETQAECVVKRSTARGFHVEKRQESLVLCWQRRELISASAWR
Links
Other
GRAS
family TFs
Other
Fragaria vesca
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACEP15271
Atta cephalotes
ACEP15271
N
CapteG214662
Capitella teleta
CapteG214662
N
Cflo_03461--XP_391891.1_APIME
Camponotus floridanus
Cflo_03461--XP_391891.1_APIME
N
CGI_10005894
Crassostrea gigas
CGI_10005894
N
ENSPMAG00000000497
Petromyzon marinus
ENSPMAG00000000497
I
GB55193
Apis mellifera
GB55193
N
GK18102
Drosophila willistoni
FBgn0220101
N
HMEL013578
Heliconius melpomene
HMEL013578
N
Hsal_01990--XP_391891.1_APIME
Harpegnathos saltator
Hsal_01990--XP_391891.1_APIME
N
ISCW004149
Ixodes scapularis
ISCW004149
N
NV13275
Nasonia vitripennis
NV13275
N
Ocbimv22013214m.g
Octopus bimaculoides
Ocbimv22013214m.g
I
SINV25019
Solenopsis invicta
SINV25019
N