CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Lus10009717.g
(
Linum usitatissimum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Lus10009717.g
T202694_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10009717
GRAS
47
467
LIHLLLTCANHVASGSLSNAEIALSQISQLSAPDGDTMQRISAYFTQALADRIIKSWPGVHSALNAAKLAIPSEEFLVKKYFYDMFPFLKVAFVLTNQAIMDAMEGEKMVHVIDLHASESAQWIALLQSLSTRQPDGPPHLRITGIHQQKEVLDRMSRELIEEAERLDIPFQFIPILSSLENLDVEKLRVKTGEALAISSALQLHPFLASDDSNESSRKLSNSNSHFQRLFQMRQQGTLGELLEKDIVVDGYSPSSDSASSSPLCNSNSKMDSFLNVLWSLSPKVMVVTEQDSNHNGVTLMERLLEALHSYAALFDCLESNMPRTSVERLKVERMLFGEQIKNIVACEGSERKERHEKLEKWIQRLEIAGFGNVGLSYYGMLQGKRLLQTYGCDGYRMKEENGCVVIGWQDRPLFSVSAWR
Links
Other
GRAS
family TFs
Other
Linum usitatissimum
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ahr1a
Takifugu rubripes
ENSTRUG00000008980
N
0.000
ahr2
Tetraodon nigroviridis
ENSTNIG00000015652
N
0.000
Alligator_sinensis_CCG008492.1
Alligator sinensis
Alligator_sinensis_CCG008492.1
N
0.000
ENSCSAVG00000008520
Ciona savignyi
ENSCSAVG00000008520
N
0.000
ENSGACG00000008458
Gasterosteus aculeatus
ENSGACG00000008458
N
0.000
ENSGMOG00000004692
Gadus morhua
ENSGMOG00000004692
N
0.000
ENSLAFG00000030495
Loxodonta africana
ENSLAFG00000030495
N
0.000
ENSONIG00000010227
Oreochromis niloticus
ENSONIG00000010227
N
0.000
ENSONIG00000012216
Oreochromis niloticus
ENSONIG00000012216
N
0.000
ENSPFOG00000008038
Poecilia formosa
ENSPFOG00000008038
N
0.000
ENSPFOG00000018959
Poecilia formosa
ENSPFOG00000018959
N
0.000
ENSTNIG00000015651
Tetraodon nigroviridis
ENSTNIG00000015651
N
0.000
ENSXMAG00000005059
Xiphophorus maculatus
ENSXMAG00000005059
N
0.000
Sakowv30000409m.g
Saccoglossus kowalevskii
Sakowv30000409m.g
N
0.000