CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10016519.g
(
Linum usitatissimum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Lus10016519.g
T202709_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10016519
GRAS
1
332
MAHYFANALETRLAGAATPKYTVDVKGKTPMAEILKAYQMFLNSCPFKRMSNFFANRTVFNLAENVSSLHIIDFGILYGFQWPCLIQRLSERPGGPPKLRITGIDFPQPGFRPTERVEETGRRLARYCERFNVPFDYKAIAQKWETIKYEDLNINPDETTVVNCLYRMRNLPDDTVAVDSARDSVLGLIHKVRPEVFIHGIANGSYNAPFFTTRFREALFHYSSLFDMFEATLQREDEHRLLFEREMYGRDIMNVVACEGSERVERPETYKQWQTRNTRAGFRQLPLNETILKKVRSTVKSEYDKDFGVDADGRWMLQGWKGRIIYGLSVWK
Links
Other
GRAS
family TFs
Other
Linum usitatissimum
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACAC_0001035001
Angiostrongylus cantonensis
ACAC_0001035001
N
0.000
ALUE_0002061101
Ascaris lumbricoides
ALUE_0002061101
N
0.000
ANCDUO_16707
Ancylostoma duodenale
ANCDUO_16707
N
0.000
ASU_07054
Ascaris suum
ASU_07054
N
0.000
CGOC_0000406001
Cylicostephanus goldi
CGOC_0000406001
N
0.000
DICVIV_00107
Dictyocaulus viviparus
DICVIV_00107
N
0.000
Hba_18740
Heterorhabditis bacteriophora
Hba_18740
N
0.000
HPBE_0002282001
Heligmosomoides bakeri
HPBE_0002282001
N
0.000
HPLM_0001554201
Haemonchus placei
HPLM_0001554201
N
0.000
OESDEN_02630
Oesophagostomum dentatum
OESDEN_02630
N
0.000
PEQ_0001381501
Parascaris equorum
PEQ_0001381501
N
0.000
PTRK_0001107500
Parastrongyloides trichosuri
PTRK_0001107500
N
0.000
SPAL_0000143100
Strongyloides papillosus
SPAL_0000143100
N
0.000
SSTP_0001030200
Strongyloides stercoralis
SSTP_0001030200
N
0.000