CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10031748.g
(
Linum usitatissimum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Lus10031748.g
T202757_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10031748
GRAS
205
596
LVHLLLACAEAVGCRDTRLAESLLNQIWSSVNPWGDSLQRVSHCFAMGLKSRLSLLLNNVNPNGTFANGGAANDVSSSISTGEQRLEAFHLLHQTTPYIAFGFMAANEAIVQAATGKNYLHIIDLGTEHTLQWPSLLRSLSSRPDGPPARIRITGLMNKNNNDPILNLALELESRMKSLAREARSIGITGFEFNLIPDTVSPSLFNSETLDLRPGETLFVNGVMNLHKFVKESRGSLKAILQAIKKLAPTLLTVVEQDANHNGPFFLGRFLESLHYYSAIFDSLEAIPCLQRNSAERMKMETRHFGEEIRNIVAYEGSDRVERHERADQWRRQLGRAGFQAVEMKCMSQARMLMSVYGCGDGDDGGFTLASEKGFMLLGWKGRPILLASAWQ
Links
Other
GRAS
family TFs
Other
Linum usitatissimum
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava11790.valid.m1
Manihot esculenta
cassava11790.valid.m1
N
cassava11791.valid.m1
Manihot esculenta
cassava11791.valid.m1
N
cassava11792.valid.m1
Manihot esculenta
cassava11792.valid.m1
N
Ciclev10021850m.g
Citrus clementina
Ciclev10021850m.g
N
Cla012999
Citrullus lanatus
Cla012999
N
Cucsa.095530
Cucumis sativus
Cucsa.095530
N
Gorai.011G138900
Gossypium raimondii
Gorai.011G138900
N
GSMUA_Achr3G19260_001
Musa acuminata
GSMUA_Achr3G19260_001
N
Lus10025581.g
Linum usitatissimum
Lus10025581.g
N
Lus10025582.g
Linum usitatissimum
Lus10025582.g
N
Lus10027045.g
Linum usitatissimum
Lus10027045.g
N
MDP0000184998
Malus domestica
MDP0000184998
N
MDP0000716430
Malus domestica
MDP0000716430
N
orange1.1g025458m.g
Citrus sinensis
orange1.1g025458m.g
N
Pm007242
Prunus mume
Pm007242
N
POPTR_0007s01590
Populus trichocarpa
POPTR_0007s01590
N
POPTR_0017s05170
Populus trichocarpa
POPTR_0017s05170
N
PRUPE_ppa010592mg
Prunus persica
PRUPE_ppa010592mg
N
SapurV1A.0947s0070
Salix purpurea
SapurV1A.0947s0070
N
TCM_019960
Theobroma cacao
TCM_019960
N
TCM_019968
Theobroma cacao
TCM_019968
N