CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g005237m.g
(
Citrus sinensis
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
orange1.1g005237m.g
T202923_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g005237m
GRAS
347
705
VIDQIFKAAELIEMGNPVLAQGILARLNHQLSPVVKPFQRAAFYVKEALQLLLHMNMNTPSAAMSGYNIIFKISAYKSFSEISPILQFANFTCNQALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELEILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFVKQLQPKIVVSLDRSCDRPDFPFAHHMVHALQSYSGLLESLDSVNVNLDALQKIERFLVYPCIEKIVLGRHRSPERLPPWRSLFMQSGFAPLTFSNFAESQADCLVQRTPVRGFHVEKRQSSLVLCWQRKELISATAWR
Links
Other
GRAS
family TFs
Other
Citrus sinensis
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AB07424.1
Alternaria brassicicola
AB07424.1
N
ACLA_025260
Aspergillus clavatus
CADACLAG00002544
N
ACRE_062480
Acremonium chrysogenum
ACRE_062480
N
AFUA_1G10280
Aspergillus fumigatus
CADAFUAG00006895
N
ANIA_01254
Aspergillus nidulans
CADANIAG00001369
N
AOL_s00006g109
Arthrobotrys oligospora
AOL_s00006g109
N
ATEG_00218
Aspergillus terreus
CADATEAG00007810
N
AUEXF2481DRAFT_32660
Aureobasidium subglaciale
AUEXF2481DRAFT_32660
N
BAUCODRAFT_81988
Baudoinia compniacensis
BAUCODRAFT_81988
N
BBA_09716
Beauveria bassiana
BBA_09716
N
Bcin11g05090
Botrytis cinerea
Bcin11g05090
N
BDDG_03679
Blastomyces dermatitidis
BDDG_03679
N
CADAFLAG00008367
Aspergillus flavus
CADAFLAG00008367
N
CADANGAG00006538
Aspergillus niger
CADANGAG00006538
N
CADAORAG00009176
Aspergillus oryzae
CADAORAG00009176
N
CCM_06155
Cordyceps militaris
CCM_06155
N
CFIO01_11103
Colletotrichum fioriniae
CFIO01_11103
N
CH063_00827
Colletotrichum higginsianum
CH063_00827
N
CHGG_01405
Chaetomium globosum
CHGG_01405
N
CIMG_10312
Coccidioides immitis
CIMG_10312
N
Cob_03340
Colletotrichum orbiculare
Cob_03340
N
COCC4DRAFT_37467
Bipolaris maydis
COCC4DRAFT_37467
N
COCCADRAFT_94634
Bipolaris zeicola
COCCADRAFT_94634
N
COCMIDRAFT_89879
Bipolaris oryzae
COCMIDRAFT_89879
N
COCSADRAFT_95919
Bipolaris sorokiniana
COCSADRAFT_95919
N
COCVIDRAFT_96285
Bipolaris victoriae
COCVIDRAFT_96285
N
CPUR_08609
Claviceps purpurea
CPUR_08609
N
CSUB01_05856
Colletotrichum sublineola
CSUB01_05856
N
CTHT_0054720
Chaetomium thermophilum
CTHT_0054720
N
DOTSEDRAFT_93227
Dothistroma septosporum
DOTSEDRAFT_93227
N
EPUS_01383
Endocarpon pusillum
EPUS_01383
N
estExt_fgenesh1_pg.C_sca_1_chr1_3_00523
Nectria haematococca
estExt_fgenesh1_pg.C_sca_1_chr1_3_00523
N
estExt_Genewise1.C_70837
Neurospora discreta
estExt_Genewise1.C_70837
N
estExt_Genewise1Plus.C_60799
Cryphonectria parasitica
estExt_Genewise1Plus.C_60799
N
EURHEDRAFT_381256
Aspergillus ruber
EURHEDRAFT_381256
N
e_gw1.00083.503.1
Aspergillus carbonarius
e_gw1.00083.503.1
N
FFUJ_00995
Fusarium fujikuroi
FFUJ_00995
N
FGRRES_00477
Fusarium graminearum
FGRRES_00477
N
FOXG_00578
Fusarium oxysporum
FOXG_00578
N
FPSE_02006
Fusarium pseudograminearum
FPSE_02006
N
FVEG_00935
Fusarium verticillioides
FVEG_00935
N
GGTG_10198
Gaeumannomyces graminis
GGTG_10198
N
GLRG_01571
Colletotrichum graminicola
GLRG_01571
N
GSTUM_00011427001
Tuber melanosporum
GSTUM_00011427001
N
gw1.1.1107.1
Mycosphaerella graminicola
gw1.1.1107.1
N
H072_9732
Dactylellina haptotyla
H072_9732
N
HCBG_03247
Histoplasma capsulatum
HCBG_03247
N
HMPREF1541_00779
Cyphellophora europaea
HMPREF1541_00779
N
LEMA_P053500.1
Leptosphaeria maculans
LEMA_P053500.1
N
M437DRAFT_43349
Aureobasidium melanogenum
M437DRAFT_43349
N
M438DRAFT_345480
Aureobasidium pullulans
M438DRAFT_345480
N
MAC_03781
Metarhizium acridum
MAC_03781
N
MAJ_00791
Metarhizium majus
MAJ_00791
N
MAM_01985
Metarhizium album
MAM_01985
N
MANI_001534
Metarhizium anisopliae
MANI_001534
N
MAPG_03172
Magnaporthe poae
MAPG_03172
N
MBR_03315
Metarhizium brunneum
MBR_03315
N
MCYG_03807
Microsporum canis
MCYG_03807
N
MCYG_03807
Arthroderma otae
MCYG_03807
N
MGG_11252
Magnaporthe oryzae
MGG_11252
N
MGU_02879
Metarhizium guizhouense
MGU_02879
N
MGYG_03415
Microsporum gypseum
MGYG_03415
N
MPH_03526
Macrophomina phaseolina
MPH_03526
N
Mycgr3G15680
Zymoseptoria tritici
Mycgr3G15680
N
MYCTH_2295158
Myceliophthora thermophila
MYCTH_2295158
N
NCU03206
Neurospora crassa
NCU03206
N
NechaG98827
Fusarium solani
NechaG98827
N
NEUTE1DRAFT_126086
Neurospora tetrasperma
NEUTE1DRAFT_126086
N
NFIA_015390
Neosartorya fischeri
CADNFIAG00001884
N
OCS_01861
Ophiocordyceps sinensis
OCS_01861
N
PAAG_02862
Paracoccidioides sp lutzii
PAAG_02862
N
PABG_03326
Paracoccidioides brasiliensis
PABG_03326
N
PAS_chr4_0275
Komagataella pastoris
PAS_chr4_0275
N
PFICI_00537
Pestalotiopsis fici
PFICI_00537
N
PMAA_044080
Talaromyces marneffei
PMAA_044080
N
PMAA_044080
Penicillium marneffei
PMAA_044080
N
PODANS_1_9030
Podospora anserina
PODANS_1_9030
N
PTRG_00498
Pyrenophora triticirepentis
PTRG_00498
N
PTT_17162
Pyrenophora teres
PTT_17162
N
PV09_02391
Verruconis gallopava
PV09_02391
N
PVAR5_5257
Byssochlamys spectabilis
PVAR5_5257
N
S40285_00587
Stachybotrys chlorohalonata
S40285_00587
N
S40288_08991
Stachybotrys chartarum
S40288_08991
N
SAPIO_CDS3548
Scedosporium apiospermum
SAPIO_CDS3548
N
SEPMUDRAFT_146122
Sphaerulina musiva
SEPMUDRAFT_146122
N
SETTUDRAFT_98023
Setosphaeria turcica
SETTUDRAFT_98023
N
SMAC_02926
Sordaria macrospora
SMAC_02926
N
SNOG_06818
Stagonospora nodorum
SNOG_06818
N
THITE_163820
Thielavia terrestris
THITE_163820
N
TRIATDRAFT_155289
Trichoderma atroviride
TRIATDRAFT_155289
N
TRIREDRAFT_73689
Trichoderma reesei
TRIREDRAFT_73689
N
TRIVIDRAFT_178335
Trichoderma virens
TRIVIDRAFT_178335
N
TSTA_074520
Talaromyces stipitatus
TSTA_074520
N
UCREL1_1680
Eutypa lata
UCREL1_1680
N
UCRNP2_6174
Neofusicoccum parvum
UCRNP2_6174
N
UCRPA7_7686
Togninia minima
UCRPA7_7686
N
UREG_03426
Uncinocarpus reesii
UREG_03426
N
UV8b_4337
Ustilaginoidea virens
UV8b_4337
N
VDAG_04420
Verticillium dahliae
VDAG_04420
N
VDBG_04878
Verticillium albo atrum
VDBG_04878
N
VDBG_04878
Verticillium alfalfae
VDBG_04878
N
VHEMI06321
Torrubiella hemipterigena
VHEMI06321
N
W97_06684
Coniosporium apollinis
W97_06684
N
X797_004055
Metarhizium robertsii
X797_004055
N
XP_002493688.1
Pichia pastoris
XP_002493688.1
N