CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g037028m.g
(
Citrus sinensis
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
orange1.1g037028m.g
T202942_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g037028m
GRAS
131
501
LVQQLIACAEAVACRDKAHASALLSELRVNALVFGTSFQRVASCFVQGLSDRLALVQPLGAVGVVGSAAKSMAITSERDESLSLVYEICPQIQFGHFVANASILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRLHQLSPKVVMLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTKRAKIEQFYFAEEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQSVPIKMLMQAKQWLRKVQTCEGYTIIEEKGCLVLGWKSKPIIAASCWK
Links
Other
GRAS
family TFs
Other
Citrus sinensis
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBG14057
Caenorhabditis briggsae
CBG14057
N
CBN14646
Caenorhabditis brenneri
CBN14646
N
CJA03891
Caenorhabditis japonica
CJA03891
N
Hba_21573
Heterorhabditis bacteriophora
Hba_21573
N
lin-32
Caenorhabditis elegans
WBGene00003018
N