CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g041748m.g
(
Citrus sinensis
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
orange1.1g041748m.g
T202948_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g041748m
GRAS
93
477
LIHLLLITATAADENNVSLALENLTELYQTVSLTGDSVQRVVAHFADGLAARLLTRRSPFYEMITKQPTEEEEFLAFTDLYRVSPYFQLAHFTANQAILEAFEEQIENNNRALHVIDFDVSYGFQWPSLIQSLSEKATNGNRISFRITGFGRSIEELQETENRLVSFSKSFRNLVFEFQGLIRGSRLVNIRKKKHETVAANLVFHLNTLKIYLKISDTLNLVRSIKPTIVTLVEQEGSRSPRNFLSRFMESLHYFAAMFDSLDDCLPQESNKRLSIEKNYLGKEIKSMLNCDESDNGNYDNYYPRYERMETWKARMESHEFGGIKMSSKSLIQAKLLLKIRTHYCPLQFDEENNNNGFKVFERYDGKAISLGWQDRCLLTATAWH
Links
Other
GRAS
family TFs
Other
Citrus sinensis
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ARB_00470
Arthroderma benhamiae
ARB_00470
N
H101_05082
Trichophyton interdigitale
H101_05082
N
H102_00291
Trichophyton rubrum
H102_00291
N
H105_00285
Trichophyton soudanense
H105_00285
N
MCYG_06232
Microsporum canis
MCYG_06232
N
MCYG_06232
Arthroderma otae
MCYG_06232
N
MGYG_06660
Microsporum gypseum
MGYG_06660
N
TEQG_05420
Trichophyton equinum
TEQG_05420
N
TRV_01616
Trichophyton verrucosum
TRV_01616
N