CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Cb02147
(
Panicum virgatum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Pavir.Cb02147
T202987_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Cb02147.1.p
GRAS
44
490
LIGLLYQCAGEVAAGAFDRANHCLEQITQVASLDAPHTLQRLAAVFADALARKLLNLVPGLSRALLSTSNSAEAHLIPAARRHLFDMLPFMKLAYLTTNHAILEAMEGEKFVHVVDLSGPASNPVQWIALFHAFRARRGGPPHLRITAVHDDKEFLANMAGALAKDAEALDIPFQFSAVEARLDDLDPDALRQLLRVRSGEALAISVVAQLHRLLAADDAGRRHVPGSSCLTPVQIIARSSPSSFGELLERELNTRLQLSPDASSVVSSLSPQSPVLQAAAQQQQRPAAAKLGSFLQAVRALSPKIMVVAEPEANHNAAAFLERFEEALNYYASLFDCLERASAAHRCAAERARVERLVLGEEVRGVVAREGAERKERHERLAQWARRMEAAGMERVGMSYGGMMEARKLLRSLGWGGSYEVVHDARGEAFFFCWHRRPLYSVSAWR
Links
Other
GRAS
family TFs
Other
Panicum virgatum
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cmyd_10015908
Chelonia mydas
Cmyd_10015908
N
ENSBTAP00000034011-D1
Bos grunniens
ENSBTAP00000034011-D1
N
ENSMPUG00000006974
Mustela putorius furo
ENSMPUG00000006974
N
ENSOARG00000012818
Ovis aries
ENSOARG00000012818
N
ENSSTOG00000010776
Ictidomys tridecemlineatus
ENSSTOG00000010776
N
HES3
Bos taurus
ENSBTAG00000024525
N
HES3
Dasypus novemcinctus
ENSDNOG00000032069
N
HES3
Equus caballus
ENSECAG00000024724
N
HES3
Loxodonta africana
ENSLAFG00000006355
N
HES3
Myotis lucifugus
ENSMLUG00000014815
N
HES3
Oryctolagus cuniculus
ENSOCUG00000028151
N
HES3
Sus scrofa
ENSSSCG00000003370
N
Myotis_brandtii_HES3_10024028
Myotis brandtii
Myotis_brandtii_HES3_10024028
N
Ogr14760
Ophisaurus gracilis
Ogr14760
N