CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ia01446
(
Panicum virgatum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Pavir.Ia01446
T203022_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ia01446.1.p
GRAS
337
707
LRTLLIHCAQAVSVNNHTLASDILSIIRQHASTSGDDSQRLAFCLADCLEVRLAGTGSQLYHKLMAKRRNAVDILKVFNLSIAICPFLRAPYYFSNKTIIDVSKGKPQVHIIDFGICFGFQWPSLFEQLAKREGGPPKVRITGIEQPQPGFRPNESSRNAGQRLADYASMFNISFEYQGISSKWETIKIDDFNIEKDDVLIVNCIYRLKNLADETVSINSARNRVLNTIRTMKPKVFIHGVVNGSYSTPFFLTRFKEVMYHYSALFDIIDKTLPRDDEARMILERDIYLPVVLNVIACEGSERIERPESYKKWKLRNKKAGFEQLPLNPDTVKGTRAMVKQYHKDFVTNEDDQWLLLGWKGRILYGIATWK
Links
Other
GRAS
family TFs
Other
Panicum virgatum
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
10098_Multiple
Saccharomyces mikatae
10098_Multiple
I
9911_YHR124W
Saccharomyces paradoxus
9911_YHR124W
I
KAFR_0F00660
Kazachstania africana
KAFR_0F00660
I
Kpol_1048p8
Vanderwaltozyma polyspora
Kpol_1048p8
N
NDT80
Saccharomyces cerevisiae
YHR124W
D
SKUD_198806
Saccharomyces kudriavzevii
SKUD_198806
I
SU7_1493
Saccharomyces arboricola
SU7_1493
I
ZBAI_09187
Zygosaccharomyces bailii
ZBAI_09187
I