CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J13985
(
Panicum virgatum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Pavir.J13985
T203057_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J13985.1.p
GRAS
47
418
MIALLMECAVAVSVGNLADANGMLLELAQMASPYASSCGERLVAYFTKAMAARLMSSWVGICAPLAPPCAAVHAAFRAFYNVSPLARFAYLACNQAILEAFHSKRLVHIVDLDVVPGGALQWLSLLPALAARPGGPPLLRVTGFGMSASALHDTGNQLAGLASKLSIPFEFYAVAKRPGDVDAVAAVPSRRPGEALAVHWLRHAMYDAAGDDGATMRLVRWLEPKMLTLVEQERGGAPGDGGGGGAGHEHGHFLGRFVSALHHYSALFDSLGASRPADEDASRHLVEHGVLGREIGNVLAVGGPSRSGRDKLGCWQAELARHGFLRAGGAGRAQLVAGACPAGLGSTVADDHDGTVRLGWKGTPLYAVSTWT
Links
Other
GRAS
family TFs
Other
Panicum virgatum
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACHR008462
Anopheles christyi
ACHR008462
N
ACUA019185
Anopheles culicifacies
ACUA019185
N
AEPI005660
Anopheles epiroticus
AEPI005660
N
AFAF017729
Anopheles farauti
AFAF017729
N
AMAM021405
Anopheles maculatus
AMAM021405
N
AMEC021072
Anopheles melas
AMEC021072
N
AMEM004700
Anopheles merus
AMEM004700
N
AQUA007866
Anopheles quadriannulatus
AQUA007866
N
ASIS015766
Anopheles sinensis
ASIS015766
N
ASTEI06221
Anopheles stephensi
ASTEI06221
N
CPIJ010848
Culex quinquefasciatus
CPIJ010848
N
CpipJ_CPIJ010848
Culex pipiens
CpipJ_CPIJ010848
N
fru
Drosophila pseudoobscura
FBgn0262676
N
fru
Drosophila erecta
FBgn0029419
N
fru
Drosophila melanogaster
FBgn0004652
D
GE25193
Drosophila yakuba
FBgn0242277
N
GE25194
Drosophila yakuba
FBgn0242278
N
GH19220
Drosophila grimshawi
FBgn0126686
N
GJ10827
Drosophila virilis
FBgn0198097
N
GL23181
Drosophila persimilis
FBgn0160771
N
LCUP000004
Lucilia cuprina
LCUP000004
N
MDOA001944
Musca domestica
MDOA001944
N
MESCA009817
Megaselia scalaris
MESCA009817
N
NV31560
Nasonia vitripennis
NV31560
N
PPAI009120
Phlebotomus papatasi
PPAI009120
N