CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J19041
(
Panicum virgatum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Pavir.J19041
T203060_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J19041.1.p
GRAS
6
147
GEPLAPKVVTMVEQDLSHSGSFLARFVEAIHYYSALFDSLDASYGEDSPERHVVEQQLLSREIRNVLAVGGPARTGDVKFGSWREKLAQSGFRSASLAGSAAAQASLLLGMFPSDGYTLVEENGALKLGWKDLCLLTASAWR
Links
Other
GRAS
family TFs
Other
Panicum virgatum
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O5_13134
Cladophialophora psammophila
A1O5_13134
N
0.000
AFUA_5G01550
Aspergillus fumigatus
CADAFUAG00002870
N
0.000
ARB_05893
Arthroderma benhamiae
ARB_05893
N
0.000
AUEXF2481DRAFT_70659
Aureobasidium subglaciale
AUEXF2481DRAFT_70659
N
0.000
CADANGAG00005441
Aspergillus niger
CADANGAG00005441
N
0.000
CFIO01_02089
Colletotrichum fioriniae
CFIO01_02089
N
0.000
CMQ_1388
Grosmannia clavigera
CMQ_1388
N
0.000
e_gw1.00771.84.1
Aspergillus carbonarius
e_gw1.00771.84.1
N
0.000
FFUJ_00276
Fusarium fujikuroi
FFUJ_00276
N
0.000
fgenesh1_pg.sca_5_chr5_3_0000637
Nectria haematococca
fgenesh1_pg.sca_5_chr5_3_0000637
N
0.000
FGRRES_00217
Fusarium graminearum
FGRRES_00217
N
0.000
FOXG_01257
Fusarium oxysporum
FOXG_01257
N
0.000
FPSE_06963
Fusarium pseudograminearum
FPSE_06963
N
0.000
GGTG_12271
Gaeumannomyces graminis
GGTG_12271
N
0.000
M438DRAFT_402343
Aureobasidium pullulans
M438DRAFT_402343
N
0.000
MAPG_09611
Magnaporthe poae
MAPG_09611
N
0.000
MGYG_08351
Microsporum gypseum
MGYG_08351
N
0.000
NechaG80838
Fusarium solani
NechaG80838
N
0.000
OIDMADRAFT_169765
Oidiodendron maius
OIDMADRAFT_169765
N
0.000
Pc16g10860
Penicillium chrysogenum
Pc16g10860
N
0.000
PCH_Pc16g10860
Penicillium rubens
PCH_Pc16g10860
N
0.000
PEX1_030190
Penicillium expansum
PEX1_030190
N
0.000
PITC_081790
Penicillium italicum
PITC_081790
N
0.000
PMAA_080390
Talaromyces marneffei
PMAA_080390
N
0.000
PMAA_080390
Penicillium marneffei
PMAA_080390
N
0.000
PV05_00069
Exophiala xenobiotica
PV05_00069
N
0.000
PV07_02862
Cladophialophora immunda
PV07_02862
N
0.000
PV11_06549
Exophiala sideris
PV11_06549
N
0.000
PVAR5_0122
Byssochlamys spectabilis
PVAR5_0122
N
0.000
S40285_08657
Stachybotrys chlorohalonata
S40285_08657
N
0.000
S40288_04526
Stachybotrys chartarum
S40288_04526
N
0.000
THITE_2107846
Thielavia terrestris
THITE_2107846
N
0.000
TSTA_114940
Talaromyces stipitatus
TSTA_114940
N
0.000
U727_00431181161
Penicillium solitum
U727_00431181161
N
0.000
UCRPA7_5783
Togninia minima
UCRPA7_5783
N
0.000
UV8b_1336
Ustilaginoidea virens
UV8b_1336
N
0.000
Z517_00469
Fonsecaea pedrosoi
Z517_00469
N
0.000
Z518_11281
Rhinocladiella mackenziei
Z518_11281
N
0.000
Z519_11260
Cladophialophora bantiana
Z519_11260
N
0.000