CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J25515
(
Panicum virgatum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Pavir.J25515
T203077_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J25515.1.p
GRAS
31
418
PRGLVLACAGLLHRGDVDGARRAAAEVLSTADPRGDAADRLAHHFGRALARRVDGGDDVAAAVPAGAAGAASSSSSAPGAPSATAYLAYNQIAPFLRFAHLTANQAILDAAAAAGGGGGGARRLHIVDLDAAHGVQWPPLLQAIADRADPDLGPPEVRITGAGPDRDVLLRTGDRLRAFAGSLNLPFRFHPLLLPRTTQLTVADPATELELHPDETLAVNCVLFLHKLGSDGEVAAFLNWVKSMNPSVVTLAEREASIGGGDCPEDLHRRVATAMDYYSAVFDALEATAPPGSADRLAVEQEVLGQEIDAVVAPGGHAGRRARGFESWAAAARAAGLSPRPLSAFAVSQARLLLRLYYPSEGYVAEEARGACFLGWQTRPLMSVSSWQ
Links
Other
GRAS
family TFs
Other
Panicum virgatum
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GA18588
Drosophila pseudoobscura
FBgn0078589
I
GD11315
Drosophila simulans
FBgn0183064
I
GE11898
Drosophila yakuba
FBgn0229682
I
GF11672
Drosophila ananassae
FBgn0088712
I
GG21821
Drosophila erecta
FBgn0113999
I
GH22024
Drosophila grimshawi
FBgn0129485
I
GI19113
Drosophila mojavensis
FBgn0141852
I
GJ22243
Drosophila virilis
FBgn0209356
I
GK22890
Drosophila willistoni
FBgn0224852
I
GL17221
Drosophila persimilis
FBgn0154824
I
GM21822
Drosophila sechellia
FBgn0176699
I
HLH54F
Drosophila melanogaster
FBgn0022740
D
LCUP002041
Lucilia cuprina
LCUP002041
I
MESCA001981
Megaselia scalaris
MESCA001981
I
SMU15030484
Schmidtea mediterranea
SMU15030484
N
SPER_0001684001
Spirometra erinaceieuropaei
SPER_0001684001
N
SSLN_0000384801
Schistocephalus solidus
SSLN_0000384801
N