CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSFALG00000007085
(
Ficedula albicollis
)
GTF2I-like
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02946 (GTF2I)
IPR004212
ENSFALG00000007085
T203411_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSFALP00000007405
GTF2I-like
125
199
LRKMVEEVFDVLYSEAMGKSSVVPLPYERFLKEPGSLAVTGLPEGISFKKPLEYDVKSLMAILEHSHSIRFRLKR
ENSFALP00000007405
GTF2I-like
338
412
LRECVQILFNSRYAEALGLDHMVPVPYRKIACDPEAVEIIGIPDKIPFKRPCTYGVPKLKRILEERHNIHFVIKR
ENSFALP00000007405
GTF2I-like
562
636
LRKQVEILFNSRYAKAIGISEPVKVPYSKFLMYPEDLFVVGLPEGILLRRPNCFGIAKLKKILQASNNIQFVIKR
ENSFALP00000007405
GTF2I-like
693
767
LREQVQDLFNKKYGEALGIKYPVQVPYKRIKSNPGSVIIEGLPPGIPFRKPCTFGSQNLERILAVADKIKFTVTR
ENSFALP00000007405
GTF2I-like
791
860
RRVKMKAVVTLKYGIAEGMSLPVLLPAFLLDGSPARTLLPLGLGSSLAFPAPAPYHHDRLFSILQSQEHN
ENSFALP00000007405
GTF2I-like
889
963
LREQVKELFNEKYGEALGLNRPVMVPYKLIRDSPESVEVTGLPDDIPFRNPNTYDIHRLEKILKARESIRIVIIN
Links
Other
GTF2I-like
family TFs
Other
Ficedula albicollis
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29739.m003717
Ricinus communis
29739.m003717
N
cassava10446.m1
Manihot esculenta
cassava10446.m1
N
Ciclev10009827m.g
Citrus clementina
Ciclev10009827m.g
N
Eucgr.C00781
Eucalyptus grandis
Eucgr.C00781
N
Gorai.009G037000
Gossypium raimondii
Gorai.009G037000
N
mgf017314m
Mimulus guttatus
mgf017314m
N
orange1.1g032258m.g
Citrus sinensis
orange1.1g032258m.g
N
PGSC0003DMG400023295
Solanum tuberosum
PGSC0003DMG400023295
N
POPTR_0018s00700
Populus trichocarpa
POPTR_0018s00700
N
SapurV1A.0283s0190
Salix purpurea
SapurV1A.0283s0190
N
SapurV1A.0521s0060
Salix purpurea
SapurV1A.0521s0060
N
SapurV1A.2946s0020
Salix purpurea
SapurV1A.2946s0020
N
Solyc07g042230.1
Solanum lycopersicum
Solyc07g042230.1
N
TCM_037487
Theobroma cacao
TCM_037487
N
VIT_11s0016g00670
Vitis vinifera
VIT_11s0016g00670
N